RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 KCTD17Q8N5Z5 321 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 CLDN23Q96B33 292 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 PAAF1Q9BRP4 392 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 OXCT2Q9BYC2 517 aaPredicted RBP13.6□□□□□ -0.23
TTC38-206ENST00000475467 RAB34Q9BZG1 259 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 CCDC113Q9H0I3 377 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 C17orf75Q9HAS0 396 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 LTB4R2Q9NPC1 389 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 TRPV5Q9NQA5 729 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 SPATA6Q9NWH7 488 aaPredicted RBP13.6□□□□□ -0.23
TTC38-206ENST00000475467 ZSCAN32Q9NX65 697 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 TNFSF13BQ9Y275 285 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 R4GN57 208 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 CACNA1AO00555 2505 aa13.6□□□□□ -0.23
TTC38-206ENST00000475467 POTEMA6NI47 508 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 FAM170BA6NMN3 283 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 PRR5-ARHGAP8B1AHC4 643 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 H7C4K7 107 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 K7ERI5 159 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 CCL16O15467 120 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 TBC1D4O60343 1298 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 LRG1P02750 347 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 MYBP10242 640 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 RPL9P32969 192 aaKnown RBP13.59□□□□□ -0.23
TTC38-206ENST00000475467 NRLP54845 237 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 MLLT6P55198 1093 aaPredicted RBP13.59□□□□□ -0.23
TTC38-206ENST00000475467 ARHGAP8P85298 464 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 SNW1Q13573 536 aaKnown RBP13.59□□□□□ -0.23
TTC38-206ENST00000475467 PDIA5Q14554 519 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 UPP1Q16831 310 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 XKR4Q5GH76 650 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 TPGS2Q68CL5 300 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 POTEGQ6S5H5 508 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 NPAS3Q8IXF0 933 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 KIAA2013Q8IYS2 634 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 SUMF1Q8NBK3 374 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 ZBTB44Q8NCP5 570 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 NSUN7Q8NE18 718 aaKnown RBP13.59□□□□□ -0.23
TTC38-206ENST00000475467 E2F7Q96AV8 911 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 ELSPBP1Q96BH3 223 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 RMDN1Q96DB5 314 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 PPP1R10Q96QC0 940 aaKnown RBP13.59□□□□□ -0.23
TTC38-206ENST00000475467 CCDC94Q9BW85 323 aaPredicted RBP13.59□□□□□ -0.23
TTC38-206ENST00000475467 FOXQ1Q9C009 403 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 FOXP1Q9H334 677 aaPredicted RBP13.59□□□□□ -0.23
TTC38-206ENST00000475467 TMEM134Q9H6X4 195 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 GPRC5CQ9NQ84 441 aa13.59□□□□□ -0.23
TTC38-206ENST00000475467 RBM19Q9Y4C8 960 aaKnown RBP13.59□□□□□ -0.23
TTC38-206ENST00000475467 MYH15Q9Y2K3 1946 aa13.58□□□□□ -0.23
TTC38-206ENST00000475467 DOCK6Q96HP0 2047 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 FAM205CA6NFA0 338 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 ABLIM3O94929 683 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 OR52Z1P0C646 297 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 GLULP15104 373 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 ATF2P15336 505 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 ADCY1Q08828 1119 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 UBXN2BQ14CS0 331 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 ME3Q16798 604 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 VARS2Q5ST30 1063 aaKnown RBP13.58□□□□□ -0.24
TTC38-206ENST00000475467 ATF7IP2Q5U623 682 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 MAEAQ7L5Y9 396 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 NOSTRINQ8IVI9 506 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 TCEAL8Q8IYN2 117 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 ELMOD1Q8N336 334 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 HASPINQ8TF76 798 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 NELL1Q92832 810 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 IRF7Q92985 503 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 MSANTD3Q96H12 275 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 RPP25Q9BUL9 199 aaKnown RBP13.58□□□□□ -0.24
TTC38-206ENST00000475467 TIPINQ9BVW5 301 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 GPR88Q9GZN0 384 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 DNMT3BQ9UBC3 853 aaKnown RBP13.58□□□□□ -0.24
TTC38-206ENST00000475467 CDY1Q9Y6F8 540 aa13.58□□□□□ -0.24
TTC38-206ENST00000475467 MED24O75448 989 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 RHOP08100 348 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 MCM7P33993 719 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 GRM5P41594 1212 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
TTC38-206ENST00000475467 CLCNKBP51801 687 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 IQCEQ6IPM2 695 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 MAML2Q8IZL2 1156 aaPredicted RBP13.57□□□□□ -0.24
TTC38-206ENST00000475467 ITFG1Q8TB96 612 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 RABGGTAQ92696 567 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 LLPHQ9BRT6 129 aaKnown RBP13.57□□□□□ -0.24
TTC38-206ENST00000475467 MRPL4Q9BYD3 311 aaKnown RBP13.57□□□□□ -0.24
TTC38-206ENST00000475467 ZFP14Q9HCL3 533 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 NCDNQ9UBB6 729 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 GDAQ9Y2T3 454 aa13.57□□□□□ -0.24
TTC38-206ENST00000475467 ZNF292O60281 2723 aa13.56□□□□□ -0.24
TTC38-206ENST00000475467 SMIM28A0A1B0GU29 152 aa13.56□□□□□ -0.24
TTC38-206ENST00000475467 LAD1O00515 517 aa13.56□□□□□ -0.24
TTC38-206ENST00000475467 PRRG1O14668 218 aa13.56□□□□□ -0.24
TTC38-206ENST00000475467 FOXD2O60548 495 aaPredicted RBP13.56□□□□□ -0.24
TTC38-206ENST00000475467 LILRB5O75023 590 aa13.56□□□□□ -0.24
TTC38-206ENST00000475467 KCNE1P15382 129 aa13.56□□□□□ -0.24
TTC38-206ENST00000475467 PAX3P23760 479 aa13.56□□□□□ -0.24
TTC38-206ENST00000475467 NTHL1P78549 312 aa13.56□□□□□ -0.24
TTC38-206ENST00000475467 LMNB2Q03252 620 aa13.56□□□□□ -0.24
TTC38-206ENST00000475467 DMP1Q13316 513 aaPredicted RBP13.56□□□□□ -0.24
TTC38-206ENST00000475467 CYP4A22Q5TCH4 519 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms