RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 NPAS3Q8IXF0 933 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 C3orf58Q8NDZ4 430 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 DDX27Q96GQ7 796 aaKnown RBP27.37■■□□□ 1.97
TMEM54-205ENST00000475208 LRWD1Q9UFC0 647 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 KCNH3Q9ULD8 1083 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 LIMCH1Q9UPQ0 1083 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 KIAA1024Q9UPX6 916 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 TNFSF13BQ9Y275 285 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 BACE2Q9Y5Z0 518 aa27.37■■□□□ 1.97
TMEM54-205ENST00000475208 COL4A3Q01955 1670 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 WDR87Q6ZQQ6 2873 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 DCHS1Q96JQ0 3298 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 TRAPPC3O43617 180 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 BRCC3P46736 316 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 GNL2Q13823 731 aaKnown RBP27.36■■□□□ 1.97
TMEM54-205ENST00000475208 NBR1Q14596 966 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 MLF2Q15773 248 aaPredicted RBP27.36■■□□□ 1.97
TMEM54-205ENST00000475208 ZC3H14Q6PJT7 736 aaKnown RBP27.36■■□□□ 1.97
TMEM54-205ENST00000475208 ANKS3Q6ZW76 656 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 CEP120Q8N960 986 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 ING5Q8WYH8 240 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 KXD1Q9BQD3 176 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 LLPHQ9BRT6 129 aaKnown RBP27.36■■□□□ 1.97
TMEM54-205ENST00000475208 DDX19AQ9NUU7 478 aaKnown RBP27.36■■□□□ 1.97
TMEM54-205ENST00000475208 PHLPP2Q6ZVD8 1323 aa27.36■■□□□ 1.97
TMEM54-205ENST00000475208 EP300Q09472 2414 aaPredicted RBP27.36■■□□□ 1.97
TMEM54-205ENST00000475208 ZNF292O60281 2723 aa27.35■■□□□ 1.97
TMEM54-205ENST00000475208 NOTCH4Q99466 2003 aa27.35■■□□□ 1.97
TMEM54-205ENST00000475208 SMIM28A0A1B0GU29 152 aa27.35■■□□□ 1.97
TMEM54-205ENST00000475208 GRM5P41594 1212 aa27.35■■□□□ 1.97
TMEM54-205ENST00000475208 YARSP54577 528 aaKnown RBP27.35■■□□□ 1.97
TMEM54-205ENST00000475208 RTL10Q7L3V2 364 aa27.35■■□□□ 1.97
TMEM54-205ENST00000475208 C4orf32Q8N8J7 132 aa27.35■■□□□ 1.97
TMEM54-205ENST00000475208 FBXO18Q8NFZ0 1043 aa27.35■■□□□ 1.97
TMEM54-205ENST00000475208 CCDC94Q9BW85 323 aaPredicted RBP27.35■■□□□ 1.97
TMEM54-205ENST00000475208 CDT1Q9H211 546 aa27.35■■□□□ 1.97
TMEM54-205ENST00000475208 TOPORSQ9NS56 1045 aaPredicted RBP27.35■■□□□ 1.97
TMEM54-205ENST00000475208 NOL7Q9UMY1 257 aaKnown RBP27.35■■□□□ 1.97
TMEM54-205ENST00000475208 TRIP11Q15643 1979 aa27.35■■□□□ 1.97
TMEM54-205ENST00000475208 KANSL1LA0AUZ9 987 aa27.34■■□□□ 1.97
TMEM54-205ENST00000475208 CCDC169A6NNP5 214 aa27.34■■□□□ 1.97
TMEM54-205ENST00000475208 EIF5BO60841 1220 aaKnown RBP27.34■■□□□ 1.97
TMEM54-205ENST00000475208 TRAPPC10P48553 1259 aa27.34■■□□□ 1.97
TMEM54-205ENST00000475208 OSTNP61366 133 aa27.34■■□□□ 1.97
TMEM54-205ENST00000475208 PRKCQQ04759 706 aa27.34■■□□□ 1.97
TMEM54-205ENST00000475208 SOX4Q06945 474 aaPredicted RBP27.34■■□□□ 1.97
TMEM54-205ENST00000475208 ZNF568Q3ZCX4 644 aa27.34■■□□□ 1.97
TMEM54-205ENST00000475208 ERMP1Q7Z2K6 904 aa27.34■■□□□ 1.97
TMEM54-205ENST00000475208 SNX29Q8TEQ0 813 aa27.34■■□□□ 1.97
TMEM54-205ENST00000475208 DDX23Q9BUQ8 820 aaKnown RBP27.34■■□□□ 1.97
TMEM54-205ENST00000475208 MRPS23Q9Y3D9 190 aaKnown RBP27.34■■□□□ 1.97
TMEM54-205ENST00000475208 MIA3Q5JRA6 1907 aa27.33■■□□□ 1.97
TMEM54-205ENST00000475208 NPTX2P47972 431 aa27.33■■□□□ 1.97
TMEM54-205ENST00000475208 PEX3P56589 373 aa27.33■■□□□ 1.97
TMEM54-205ENST00000475208 PFKPQ01813 784 aa27.33■■□□□ 1.97
TMEM54-205ENST00000475208 SLC44A4Q53GD3 710 aa27.33■■□□□ 1.97
TMEM54-205ENST00000475208 ACO2Q99798 780 aaKnown RBP27.33■■□□□ 1.97
TMEM54-205ENST00000475208 RHOP08100 348 aa27.32■■□□□ 1.96
TMEM54-205ENST00000475208 HMGN5P82970 282 aaKnown RBP27.32■■□□□ 1.96
TMEM54-205ENST00000475208 ROR1Q01973 937 aa27.32■■□□□ 1.96
TMEM54-205ENST00000475208 UBXN2BQ14CS0 331 aa27.32■■□□□ 1.96
TMEM54-205ENST00000475208 XKR4Q5GH76 650 aa27.32■■□□□ 1.96
TMEM54-205ENST00000475208 MRPL4Q9BYD3 311 aaKnown RBP27.32■■□□□ 1.96
TMEM54-205ENST00000475208 BCO2Q9BYV7 579 aa27.32■■□□□ 1.96
TMEM54-205ENST00000475208 PTPRHQ9HD43 1115 aa27.32■■□□□ 1.96
TMEM54-205ENST00000475208 SLC38A7Q9NVC3 462 aa27.32■■□□□ 1.96
TMEM54-205ENST00000475208 PODXLO00592 558 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 HIP1RO75146 1068 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 SEC24BO95487 1268 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 DMP1Q13316 513 aaPredicted RBP27.31■■□□□ 1.96
TMEM54-205ENST00000475208 SLC5A9Q2M3M2 681 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 VARS2Q5ST30 1063 aaKnown RBP27.31■■□□□ 1.96
TMEM54-205ENST00000475208 SLC8B1Q6J4K2 584 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 ALKAL1Q6UXT8 129 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 MAML2Q8IZL2 1156 aaPredicted RBP27.31■■□□□ 1.96
TMEM54-205ENST00000475208 DAW1Q8N136 415 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 IGSF22Q8N9C0 903 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 FAM184AQ8NB25 1140 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 MCRS1Q96EZ8 462 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 TARS2Q9BW92 718 aaKnown RBP27.31■■□□□ 1.96
TMEM54-205ENST00000475208 RAB34Q9BZG1 259 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 TMEM134Q9H6X4 195 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 PPP4R2Q9NY27 417 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 MTF2Q9Y483 593 aaPredicted RBP27.31■■□□□ 1.96
TMEM54-205ENST00000475208 STK24Q9Y6E0 443 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 FANCMQ8IYD8 2048 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 CACNA1IQ9P0X4 2223 aa27.31■■□□□ 1.96
TMEM54-205ENST00000475208 E9PMD0 336 aa27.3■■□□□ 1.96
TMEM54-205ENST00000475208 PDIA5Q14554 519 aa27.3■■□□□ 1.96
TMEM54-205ENST00000475208 TAS1R3Q7RTX0 852 aa27.3■■□□□ 1.96
TMEM54-205ENST00000475208 ZNF461Q8TAF7 563 aa27.3■■□□□ 1.96
TMEM54-205ENST00000475208 ZMAT2Q96NC0 199 aaKnown RBP27.3■■□□□ 1.96
TMEM54-205ENST00000475208 HINFPQ9BQA5 517 aa27.3■■□□□ 1.96
TMEM54-205ENST00000475208 SPATA6Q9NWH7 488 aaPredicted RBP27.3■■□□□ 1.96
TMEM54-205ENST00000475208 ARHGAP28Q9P2N2 729 aa27.3■■□□□ 1.96
TMEM54-205ENST00000475208 DNM3Q9UQ16 869 aa27.3■■□□□ 1.96
TMEM54-205ENST00000475208 ARHGEF37A1IGU5 675 aa27.29■■□□□ 1.96
TMEM54-205ENST00000475208 WDR27A2RRH5 827 aa27.29■■□□□ 1.96
TMEM54-205ENST00000475208 ECI2O75521 394 aa27.29■■□□□ 1.96
TMEM54-205ENST00000475208 LRG1P02750 347 aa27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms