RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 CRELD2Q6UXH1 353 aaPredicted RBP8.73□□□□□ -1.01
HPS1-210ENST00000474873 TMEM173Q86WV6 379 aaPredicted RBP8.73□□□□□ -1.01
HPS1-210ENST00000474873 NELFCDQ8IXH7 590 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 C12orf56Q8IXR9 622 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 MICAL1Q8TDZ2 1067 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 TMEM174Q8WUU8 243 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 SMARCE1Q969G3 411 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 UROC1Q96N76 676 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 ZMAT2Q96NC0 199 aaKnown RBP8.73□□□□□ -1.01
HPS1-210ENST00000474873 CBWD1Q9BRT8 395 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 FAM213AQ9BRX8 229 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 KIAA1586Q9HCI6 787 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 NGRNQ9NPE2 291 aaKnown RBP8.73□□□□□ -1.01
HPS1-210ENST00000474873 AGPAT3Q9NRZ7 376 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 PRG3Q9Y2Y8 225 aaPredicted RBP8.73□□□□□ -1.01
HPS1-210ENST00000474873 DERAQ9Y315 318 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 PCDHA5Q9Y5H7 936 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 KIAA1671Q9BY89 1806 aa8.73□□□□□ -1.01
HPS1-210ENST00000474873 TDRD15B5MCY1 1934 aaKnown RBP8.72□□□□□ -1.01
HPS1-210ENST00000474873 CITO14578 2027 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 CASTOR2A6NHX0 329 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 GOLGA6L22H0YM25 854 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 TMEM189-UBE2V1I3L0A0 370 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 PDXKO00764 312 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 FSCN2O14926 492 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 XPOTO43592 962 aaKnown RBP8.72□□□□□ -1.01
HPS1-210ENST00000474873 NCK2O43639 380 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 TADA2AO75478 443 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 EFEMP2O95967 443 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 CYP3A5P20815 502 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 ERVFC1P60507 584 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 CCDC85BQ15834 202 aaPredicted RBP8.72□□□□□ -1.01
HPS1-210ENST00000474873 UPP1Q16831 310 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 TMC7Q7Z402 723 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 VPS52Q8N1B4 723 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 GPD1LQ8N335 351 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 GUF1Q8N442 669 aaKnown RBP8.72□□□□□ -1.01
HPS1-210ENST00000474873 MRPL43Q8N983 215 aaKnown RBP8.72□□□□□ -1.01
HPS1-210ENST00000474873 BCL7CQ8WUZ0 217 aaPredicted RBP8.72□□□□□ -1.01
HPS1-210ENST00000474873 PPP2R3CQ969Q6 453 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 C18orf25Q96B23 403 aaPredicted RBP8.72□□□□□ -1.01
HPS1-210ENST00000474873 SAAL1Q96ER3 474 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 KIF12Q96FN5 646 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 FBXL18Q96ME1 805 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 PAAF1Q9BRP4 392 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 VN1R3Q9BXE9 311 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 PCIF1Q9H4Z3 704 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 NSUN3Q9H649 340 aaKnown RBP8.72□□□□□ -1.01
HPS1-210ENST00000474873 LMBRD1Q9NUN5 540 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 MARCH5Q9NX47 278 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 HSPBP1Q9NZL4 362 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 ADAM28Q9UKQ2 775 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 UBQLN1Q9UMX0 589 aaKnown RBP8.72□□□□□ -1.01
HPS1-210ENST00000474873 C2CD2Q9Y426 696 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 IRAK3Q9Y616 596 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 BRWD1Q9NSI6 2320 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 TRIP11Q15643 1979 aa8.72□□□□□ -1.01
HPS1-210ENST00000474873 ZNF233A6NK53 670 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 F8W810 466 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 CLIC2O15247 247 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 TRAPPC3O43617 180 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 B3GAT3O94766 335 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 CXCL14O95715 111 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 SOD2P04179 222 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 CTSAP10619 480 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 IRS1P35568 1242 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 CLCNKBP51801 687 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 SOX4Q06945 474 aaPredicted RBP8.71□□□□□ -1.02
HPS1-210ENST00000474873 ELAVL2Q12926 359 aaKnown RBP8.71□□□□□ -1.02
HPS1-210ENST00000474873 MYBPC2Q14324 1141 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 SMC1AQ14683 1233 aaKnown RBP8.71□□□□□ -1.02
HPS1-210ENST00000474873 TMEM132DQ14C87 1099 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 SNRNP35Q16560 246 aaKnown RBP8.71□□□□□ -1.02
HPS1-210ENST00000474873 COBLL1Q53SF7 1204 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 TCEAL5Q5H9L2 206 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 ZNF658Q5TYW1 1059 aaPredicted RBP8.71□□□□□ -1.02
HPS1-210ENST00000474873 SPATA1Q5VX52 437 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 JADE1Q6IE81 842 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 NT5DC4Q86YG4 428 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 SLC9A9Q8IVB4 645 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 BRSK2Q8IWQ3 736 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 GPR65Q8IYL9 337 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 RNF168Q8IYW5 571 aaPredicted RBP8.71□□□□□ -1.02
HPS1-210ENST00000474873 MICALL1Q8N3F8 863 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 XXYLT1Q8NBI6 393 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 ZSWIM2Q8NEG5 633 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 RABGGTAQ92696 567 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 ERCC4Q92889 916 aaPredicted RBP8.71□□□□□ -1.02
HPS1-210ENST00000474873 FAM212AQ96EL1 285 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 TCF25Q9BQ70 676 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 ZBP1Q9H171 429 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 KCTD10Q9H3F6 313 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 ENTPD7Q9NQZ7 604 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 CHST7Q9NS84 486 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 RBAKQ9NYW8 714 aaPredicted RBP8.71□□□□□ -1.02
HPS1-210ENST00000474873 TRAF3IP3Q9Y228 551 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 SSX2IPQ9Y2D8 614 aa8.71□□□□□ -1.02
HPS1-210ENST00000474873 SF3B1O75533 1304 aaKnown RBP eCLIP8.71□□□□□ -1.02
HPS1-210ENST00000474873 COL4A4P53420 1690 aaPredicted RBP8.71□□□□□ -1.02
HPS1-210ENST00000474873 XIRP2A4UGR9 3374 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms