RNA–Protein interactions for RNA: ENST00000474721.1

PIKFYVE-208, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, human

TSL 4

Gene PIKFYVE, Length 538 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIKFYVE-208	ENST00000474721	MATN4	O95460	622 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ENPP1	P22413	925 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	FGFR4	P22455	802 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ABCG1	P45844	678 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	HSD11B2	P80365	405 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	PDCD1	Q15116	288 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	AKNAD1	Q5T1N1	836 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	AFMID	Q63HM1	303 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	SRRM1	Q8IYB3	904 aa	Known RBP	4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	PQLC1	Q8N2U9	271 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	SMG7	Q92540	1137 aa	Known RBP	4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	FATE1	Q969F0	183 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	SLC29A3	Q9BZD2	475 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	SENP6	Q9GZR1	1112 aa	Predicted RBP	4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	TOPORS	Q9NS56	1045 aa	Predicted RBP	4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ZBTB21	Q9ULJ3	1066 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ATRNL1	Q5VV63	1379 aa		4.64	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ORC4	O43929	436 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	PROP1	O75360	226 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	RBMXL2	O75526	392 aa	Known RBP	4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	CKB	P12277	381 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	GCSH	P23434	173 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	SESN3	P58005	492 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721		Q6ZVL8	140 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	STON2	Q8WXE9	905 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	AUTS2	Q8WXX7	1259 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	PDLIM2	Q96JY6	352 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	FAM30A	Q9NZY2	134 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	FOXJ2	Q9P0K8	574 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	AATK	Q6ZMQ8	1374 aa		4.63	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	LRRC3C	A6NJW4	275 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	TEX33	O43247	280 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	PEX1	O43933	1283 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	MTHFD2	P13995	350 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	SREBF1	P36956	1147 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	CCT2	P78371	535 aa	Known RBP	4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	MRPS9	P82933	396 aa	Known RBP	4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	FOXF2	Q12947	444 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	CYP2A13	Q16696	494 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	DALRD3	Q5D0E6	543 aa	Known RBP	4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	MUM1L1	Q5H9M0	696 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ZNF529	Q6P280	563 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	MICALCL	Q6ZW33	695 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	UBXN4	Q92575	508 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	DRC1	Q96MC2	740 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	KLK15	Q9H2R5	256 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	PIF1	Q9H611	641 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	GREM2	Q9H772	168 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	KMT5A	Q9NQR1	393 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	LANCL2	Q9NS86	450 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	RBM12	Q9NTZ6	932 aa	Known RBP	4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	TMEM140	Q9NV12	185 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	KCTD5	Q9NXV2	234 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	RNF7	Q9UBF6	113 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	LMTK3	Q96Q04	1460 aa		4.62	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	MGST3	O14880	152 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ALAS1	P13196	640 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ITGB6	P18564	788 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	VAV2	P52735	878 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	SRSF4	Q08170	494 aa	Known RBP	4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	DHCR24	Q15392	516 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	OTUD7B	Q6GQQ9	843 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	GRASP	Q7Z6J2	395 aa	Predicted RBP	4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	NACC2	Q96BF6	587 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	TTC1	Q99614	292 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ACE2	Q9BYF1	805 aa	Predicted RBP	4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	IFT22	Q9H7X7	185 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	UNKL	Q9H9P5	680 aa	Known RBP	4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	IFT122	Q9HBG6	1241 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	USP25	Q9UHP3	1055 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	MAPRE3	Q9UPY8	281 aa		4.61	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	DNAJC9-AS1	A6NH13	148 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	GOLGA8A	A7E2F4	631 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	GSG1L2	A8MUP6	293 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ZEB2	O60315	1214 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	C1QL1	O75973	258 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	MYCLP1	P12525	358 aa	Predicted RBP	4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	BPI	P17213	487 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	SLC6A2	P23975	617 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ALDH1A3	P47895	512 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	NOMO1	Q15155	1222 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ADRM1	Q16186	407 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	DDX46	Q7L014	1031 aa	Known RBP	4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	LNX2	Q8N448	690 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	MED15	Q96RN5	788 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	PNKP	Q96T60	521 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ADI1	Q9BV57	179 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	QRSL1	Q9H0R6	528 aa	Known RBP	4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ASB6	Q9NWX5	421 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	SIK3	Q9Y2K2	1263 aa		4.6	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	TRGV11	A0A075B6L2	103 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	CCDC151	A5D8V7	595 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	PDE8A	O60658	829 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	ENDOD1	O94919	500 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	FOLR3	P41439	243 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	MUM1	Q2TAK8	710 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	TAF7L	Q5H9L4	462 aa		4.59	□□□□□ -1.67
PIKFYVE-208	ENST00000474721	BHLHA9	Q7RTU4	235 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms