RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 CLTAP09496 248 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 CETPP11597 493 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 HOXD8P13378 290 aaPredicted RBP10.53□□□□□ -0.72
USP39-214ENST00000474572 TNNI1P19237 187 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 MARK3P27448 753 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 USP8P40818 1118 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 GCLCP48506 637 aaPredicted RBP10.53□□□□□ -0.72
USP39-214ENST00000474572 DNA2P51530 1060 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 GTF2A2P52657 109 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 ZNF132P52740 706 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 SLC7A5Q01650 507 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 CENPCQ03188 943 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 PAK2Q13177 524 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 LAMC2Q13753 1193 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 PPP2R5EQ16537 467 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 FAM187BQ17R55 369 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 ZNF484Q5JVG2 852 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 TAF3Q5VWG9 929 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 TRIM72Q6ZMU5 477 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 TSHZ1Q6ZSZ6 1077 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 OR5B17Q8NGF7 314 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 SEC14L1Q92503 715 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 GLG1Q92896 1179 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 WNT8AQ9H1J5 351 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 ACP6Q9NPH0 428 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 PDGFCQ9NRA1 345 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 CTTNBP2NLQ9P2B4 639 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 ANKFY1Q9P2R3 1169 aa10.53□□□□□ -0.72
USP39-214ENST00000474572 AGPSO00116 658 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 PDHXO00330 501 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 CLDN3O15551 220 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 STRNO43815 780 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 ASS1P00966 412 aaKnown RBP10.52□□□□□ -0.73
USP39-214ENST00000474572 GH1P01241 217 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 HOXC6P09630 235 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 MYBL1P10243 752 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 CYP2C8P10632 490 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 HSPA6P17066 643 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 ADORA2AP29274 412 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 CTNNA1P35221 906 aaKnown RBP10.52□□□□□ -0.73
USP39-214ENST00000474572 PEX5P50542 639 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 PTENP60484 403 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 IRF5Q13568 498 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 TFDP1Q14186 410 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 MAPK6Q16659 721 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
USP39-214ENST00000474572 TMEM63BQ5T3F8 832 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 LMBRD2Q68DH5 695 aaPredicted RBP10.52□□□□□ -0.73
USP39-214ENST00000474572 PPP1R2P3Q6NXS1 205 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 MPZL3Q6UWV2 235 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 LRRC71Q8N4P6 559 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 RNF149Q8NC42 400 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 ZNF564Q8TBZ8 553 aaPredicted RBP10.52□□□□□ -0.73
USP39-214ENST00000474572 CASKIN2Q8WXE0 1202 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 BRI3BPQ8WY22 251 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 ALG3Q92685 438 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 ZNF653Q96CK0 615 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 TRIM11Q96F44 468 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 FAXDC2Q96IV6 333 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 FAM84AQ96KN4 292 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 RNPC3Q96LT9 517 aaKnown RBP10.52□□□□□ -0.73
USP39-214ENST00000474572 NAP1L3Q99457 506 aaPredicted RBP10.52□□□□□ -0.73
USP39-214ENST00000474572 ZSWIM1Q9BR11 485 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 EPB41L5Q9HCM4 733 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.52□□□□□ -0.73
USP39-214ENST00000474572 PSD3Q9NYI0 1048 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 ERAP1Q9NZ08 941 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 TRPC6Q9Y210 931 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 TNFSF13BQ9Y275 285 aa10.52□□□□□ -0.73
USP39-214ENST00000474572 EVPLQ92817 2033 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 CCDC66A2RUB6 948 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 ZSCAN5CA6NGD5 496 aaPredicted RBP10.51□□□□□ -0.73
USP39-214ENST00000474572 KRIT1O00522 736 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 SART1O43290 800 aaKnown RBP10.51□□□□□ -0.73
USP39-214ENST00000474572 B4GALT4O60513 344 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 LGALS2P05162 132 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 KRT5P13647 590 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 COMTP21964 271 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 ECHS1P30084 290 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 TNFSF9P41273 254 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 TNNT3P45378 269 aaPredicted RBP10.51□□□□□ -0.73
USP39-214ENST00000474572 CARSP49589 748 aaKnown RBP10.51□□□□□ -0.73
USP39-214ENST00000474572 NOMO3P69849 1222 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 NOP14P78316 857 aaKnown RBP10.51□□□□□ -0.73
USP39-214ENST00000474572 GUCY2DQ02846 1103 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 MBTD1Q05BQ5 628 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 BIRC3Q13489 604 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 CUL1Q13616 776 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 NCOA4Q13772 614 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 GRB14Q14449 540 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 SPOPLQ6IQ16 392 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 SND1Q7KZF4 910 aaKnown RBP eCLIP10.51□□□□□ -0.73
USP39-214ENST00000474572 MON1BQ7L1V2 547 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 MCOLN2Q8IZK6 566 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 PPTC7Q8NI37 304 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 WHAMMQ8TF30 809 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 VCPIP1Q96JH7 1222 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 SH3GL2Q99962 352 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 NUP85Q9BW27 656 aa10.51□□□□□ -0.73
USP39-214ENST00000474572 PRDM10Q9NQV6 1147 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms