RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 GRAMD1AQ96CP6 724 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 MED30Q96HR3 178 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 PGBD1Q96JS3 809 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 ADAD1Q96M93 576 aaKnown RBP3.73□□□□□ -1.81
UBR3-208ENST00000474426 SPZ1Q9BXG8 430 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 CALN1Q9BXU9 219 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 SENP6Q9GZR1 1112 aaPredicted RBP3.73□□□□□ -1.81
UBR3-208ENST00000474426 SLITRK6Q9H5Y7 841 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 SYNDIG1Q9H7V2 258 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 FANCEQ9HB96 536 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 NEK6Q9HC98 313 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 ITM2CQ9NQX7 267 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 USP40Q9NVE5 1235 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 TBC1D29Q9UFV1 150 aa3.73□□□□□ -1.81
UBR3-208ENST00000474426 KDM2BQ8NHM5 1336 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 A0A0B4J269 797 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CCDC162PA2VCL2 907 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 E9PMD0 336 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 GOLGA8SH3BPF8 625 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 KPNA5O15131 536 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 TSPAN3O60637 253 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 KERAO60938 352 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 TSPAN9O75954 239 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ASGR2P07307 311 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ACAA1P09110 424 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 TIMP2P16035 220 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ALDH3A1P30838 453 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ALDH3A2P51648 485 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ENPEPQ07075 957 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 GRSF1Q12849 480 aaKnown RBP eCLIP3.72□□□□□ -1.81
UBR3-208ENST00000474426 IDI1Q13907 227 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ERV3-1Q14264 604 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 TCEA2Q15560 299 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ZNF827Q17R98 1081 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 KCNT1Q5JUK3 1230 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 PPP1R15BQ5SWA1 713 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 NCAPH2Q6IBW4 605 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 METTL2BQ6P1Q9 378 aaKnown RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 C4orf50Q6ZRC1 276 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 SRGAP1Q7Z6B7 1085 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 NIM1KQ8IY84 436 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CCNYL1Q8N7R7 359 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ANKS4BQ8N8V4 417 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 AVL9Q8NBF6 648 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 RUBCNQ92622 972 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 SYN2Q92777 582 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 SLC22A18Q96BI1 424 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 PKP4Q99569 1192 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 MNTQ99583 582 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CFHR5Q9BXR6 569 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 RBCK1Q9BYM8 510 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ESF1Q9H501 851 aaKnown RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 TMEM206Q9H813 350 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 PRDM5Q9NQX1 630 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 AAASQ9NRG9 546 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 MBD2Q9UBB5 411 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CIDEBQ9UHD4 219 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 SLC7A8Q9UHI5 535 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 LNPEPQ9UIQ6 1025 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 MOSPD1Q9UJG1 213 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 PLAAQ9Y263 795 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 FHOD1Q9Y613 1164 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ERBINQ96RT1 1412 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 KRT87PA6NCN2 255 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 GOLGA6L9A6NEM1 432 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 GSG1L2A8MUP6 293 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 F8W810 466 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 H3BUI4 141 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 GPR182O15218 404 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 KMOO15229 486 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 DDX3YO15523 660 aaKnown RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 TLR2O60603 784 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 FMO6PO60774 539 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ZC3H11AO75152 810 aaKnown RBP eCLIP3.72□□□□□ -1.81
UBR3-208ENST00000474426 GJB3O75712 270 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 LINGO3P0C6S8 592 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 PF4V1P10720 104 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ARF4P18085 180 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 KRT2P35908 639 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 STAT4Q14765 748 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 NCF4Q15080 339 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 TAF12Q16514 161 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 HADHQ16836 314 aaKnown RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 ALG11Q2TAA5 492 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 OLFML2BQ68BL8 750 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 ELMSAN1Q6PJG2 1045 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 SARM1Q6SZW1 724 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 LRP10Q7Z4F1 713 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 DPP9Q86TI2 863 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 NATD1Q8N6N6 113 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 COG1Q8WTW3 980 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 KRT35Q92764 455 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 C11orf24Q96F05 449 aaPredicted RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 XAGE2Q96GT9 111 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 CRELD1Q96HD1 420 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 PRKD2Q9BZL6 878 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 UNKQ9C0B0 810 aaKnown RBP3.72□□□□□ -1.81
UBR3-208ENST00000474426 YIPF3Q9GZM5 350 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 MYLK2Q9H1R3 596 aa3.72□□□□□ -1.81
UBR3-208ENST00000474426 FBRSQ9HAH7 460 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms