RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 BMP1P13497 986 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ATP1A2P50993 1020 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 YARSP54577 528 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 TRAP1Q12931 704 aaKnown RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 CCDC40Q4G0X9 1142 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 TMEM67Q5HYA8 995 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 PCNX4Q63HM2 1172 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ELMSAN1Q6PJG2 1045 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 B3GNT6Q6ZMB0 384 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 RGS9BPQ6ZS82 235 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 SPATC1Q76KD6 591 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 HOOK3Q86VS8 718 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 CNTD1Q8N815 330 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 PPM1NQ8N819 430 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 MOSPD2Q8NHP6 518 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 TPCN2Q8NHX9 752 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 DEPTORQ8TB45 409 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 FOXJ1Q92949 421 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ATP2A3Q93084 1043 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 EXOC4Q96A65 974 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 SHISA4Q96DD7 197 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ATP6V1G3Q96LB4 118 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ACAP3Q96P50 834 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 TMEM237Q96Q45 408 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 WDR24Q96S15 920 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 SIL1Q9H173 461 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 SLC12A5Q9H2X9 1139 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 OSGEPQ9NPF4 335 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 UBN1Q9NPG3 1134 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 VPS45Q9NRW7 570 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 JAG2Q9Y219 1238 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 ANKRD6Q9Y2G4 727 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 NCOR1O75376 2440 aa6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 COL2A1P02458 1487 aaPredicted RBP6.55□□□□□ -1.36
SMARCE1-208ENST00000474246 E9PCH4 1651 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 PLEKHH1Q9ULM0 1364 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 SLC12A8A0AV02 714 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 GOLGA6L4A6NEF3 574 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 ENO4A6NNW6 628 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 H0YIN7 160 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 L7N2F9 121 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 NDUFAB1O14561 156 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 THAP12O43422 761 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 EXTL3O43909 919 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 POP4O95707 220 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 CSF2RAP15509 400 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 LPOP22079 712 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 CYP2C19P33261 490 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 SLC16A2P36021 539 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 DRG2P55039 364 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 SSRP1Q08945 709 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 SREBF2Q12772 1141 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 MTX1Q13505 466 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 CUL2Q13617 745 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 CBX2Q14781 532 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 THOC7Q6I9Y2 204 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 ARHGAP11AQ6P4F7 1023 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 SHQ1Q6PI26 577 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 ZNF600Q6ZNG1 722 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 GPR155Q7Z3F1 870 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 ZBTB33Q86T24 672 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 TRIM50Q86XT4 487 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 GRAMD2AQ8IUY3 354 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 TMCO5AQ8N6Q1 288 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 ZNF511Q8NB15 262 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 SLC4A11Q8NBS3 891 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 WHAMMQ8TF30 809 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 SLC7A3Q8WY07 619 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 GPKOWQ92917 476 aaPredicted RBP eCLIP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 RUNDC3BQ96NL0 473 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 FAM193BQ96PV7 902 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 CTAGE1Q96RT6 745 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 HNRNPABQ99729 332 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 EHMT1Q9H9B1 1298 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 KBTBD4Q9NVX7 518 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 PLA2G2EQ9NZK7 142 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 HOOK1Q9UJC3 728 aaKnown RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 RASAL2Q9UJF2 1139 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 MED16Q9Y2X0 877 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 ATP6V1DQ9Y5K8 247 aa6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 POLR3AO14802 1390 aaPredicted RBP6.54□□□□□ -1.36
SMARCE1-208ENST00000474246 TRAV6A0A075B6T7 132 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 SULT1B1O43704 296 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 FZD6O60353 706 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 RFPL3O75679 317 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ATP5BP06576 529 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ASGR2P07307 311 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TROVE2P10155 538 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 COL6A2P12110 1019 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 JAK1P23458 1154 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 IDUAP35475 653 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 ETV3P41162 512 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 AP3M2P53677 418 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 STAT4Q14765 748 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 TRIM71Q2Q1W2 868 aaKnown RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 KCNT1Q5JUK3 1230 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 CNNM4Q6P4Q7 775 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 CEP128Q6ZU80 1094 aa6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 PDZD4Q76G19 769 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-208ENST00000474246 LSMEM2Q8N112 164 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms