RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 XPNPEP1Q9NQW7 623 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 SH2B1Q9NRF2 756 aaPredicted RBP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 CACNG4Q9UBN1 327 aa5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 DDX25Q9UHL0 483 aaKnown RBP5.71□□□□□ -1.5
SNRNP40-204ENST00000474025 TDRD15B5MCY1 1934 aaKnown RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 ARID2Q68CP9 1835 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 DCDC2BA2VCK2 349 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 SHISA7A6NL88 538 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 INO80B-WBP1J3KQ70 363 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 SMAPO00193 183 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 ZBTB39O15060 712 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 ASAP2O43150 1006 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 ADAM12O43184 909 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 TBC1D4O60343 1298 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 DKC1O60832 514 aaKnown RBP eCLIP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 XYLBO75191 536 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 TADA2AO75478 443 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 KIF4AO95239 1232 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 C8AP07357 584 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 TDGF1P13385 188 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 ARF4P18085 180 aaPredicted RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 AKAP5P24588 427 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 PDIA3P30101 505 aaKnown RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 RPS9P46781 194 aaKnown RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 EVCP57679 992 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 SPIRE1Q08AE8 756 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 FZD5Q13467 585 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 CAPSQ13938 189 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 COL9A2Q14055 689 aaPredicted RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 HSP90AA2PQ14568 343 aaPredicted RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 MXD4Q14582 209 aaPredicted RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 PSMD5Q16401 504 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 INF2Q27J81 1249 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 BMP2KLQ5H9B9 411 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 PPM1LQ5SGD2 360 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 ZBTB41Q5SVQ8 909 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 FAM171A1Q5VUB5 890 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 TSSK4Q6SA08 328 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 TPRG1Q6ZUI0 275 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 CDR2LQ86X02 465 aaPredicted RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 HACE1Q8IYU2 909 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 BLIDQ8IZY5 108 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 DAGLBQ8NCG7 672 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 LNX1Q8TBB1 728 aaPredicted RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 SLC7A14Q8TBB6 771 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 ASAP3Q8TDY4 903 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 HASPINQ8TF76 798 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 KCNB2Q92953 911 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 FAM20AQ96MK3 541 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 JAKMIP1Q96N16 626 aaKnown RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 MTRQ99707 1265 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 TTPALQ9BTX7 342 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 PHF20Q9BVI0 1012 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 NFKBIZQ9BYH8 718 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 FAM126AQ9BYI3 521 aaPredicted RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 TRIM6Q9C030 488 aaPredicted RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 NPDC1Q9NQX5 325 aaPredicted RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 HCFC1R1Q9NWW0 138 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 RGL1Q9NZL6 768 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 KLK14Q9P0G3 267 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 KCNH3Q9ULD8 1083 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 USP18Q9UMW8 372 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 POLIQ9UNA4 740 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 NOTCH4Q99466 2003 aa5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 FASNP49327 2511 aaKnown RBP5.7□□□□□ -1.5
SNRNP40-204ENST00000474025 PKD1L2Q7Z442 2459 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 A0A1B0GUA9 196 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 CASTOR2A6NHX0 329 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 C3orf80F5H4A9 247 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 PTGESO14684 152 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 NCAM2O15394 837 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 B4GALT5O43286 388 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 ECI2O75521 394 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 NPTXRO95502 500 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 RPS6KB1P23443 525 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 ARL2P36404 184 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 CCT2P78371 535 aaKnown RBP5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 CYP4A11Q02928 519 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 POU5F1BQ06416 359 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 ADCY1Q08828 1119 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 NCBP1Q09161 790 aaKnown RBP5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 MTAPQ13126 283 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 TUSC3Q13454 348 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 RAB33AQ14088 237 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 TFDP1Q14186 410 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 EPHA7Q15375 998 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 NAB2Q15742 525 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 SLC5A9Q2M3M2 681 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 UVSSAQ2YD98 709 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 PABPC1LQ4VXU2 614 aaKnown RBP5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 XKR9Q5GH70 373 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 AXDND1Q5T1B0 1012 aaPredicted RBP5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 PPP4R3AQ6IN85 833 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 GALNT17Q6IS24 598 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 SLC27A1Q6PCB7 646 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 BLOC1S2Q6QNY1 142 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 ZNF852Q6ZMS4 543 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 RTL10Q7L3V2 364 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 OTUD6AQ7L8S5 288 aa5.69□□□□□ -1.5
SNRNP40-204ENST00000474025 KRT25Q7Z3Z0 450 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms