RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 VPS11Q9H270 941 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 ZMAT3Q9HA38 289 aaKnown RBP5.15□□□□□ -1.59
BRCA1-212ENST00000473961 RSAD1Q9HA92 442 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 BARX1Q9HBU1 254 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-212ENST00000473961 JADE2Q9NQC1 790 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 SERHLQ9NQF3 203 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 SPATA6Q9NWH7 488 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-212ENST00000473961 SIDT1Q9NXL6 827 aaKnown RBP5.15□□□□□ -1.59
BRCA1-212ENST00000473961 GPRC5DQ9NZD1 345 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 TRPS1Q9UHF7 1281 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 CNOT6Q9ULM6 557 aaKnown RBP5.15□□□□□ -1.59
BRCA1-212ENST00000473961 CEP83Q9Y592 693 aa5.15□□□□□ -1.59
BRCA1-212ENST00000473961 KLRG2A4D1S0 409 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-212ENST00000473961 TBX3O15119 743 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 KPNA5O15131 536 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 ITGA10O75578 1167 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 JUNP05412 331 aaKnown RBP5.14□□□□□ -1.59
BRCA1-212ENST00000473961 PARP1P09874 1014 aaKnown RBP5.14□□□□□ -1.59
BRCA1-212ENST00000473961 IL13P35225 146 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 PTPN7P35236 360 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 SREBF1P36956 1147 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 STT3AP46977 705 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 CTXN1P60606 82 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 PTH1RQ03431 593 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 TLE1Q04724 770 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 DAG1Q14118 895 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 CNGA2Q16280 664 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 GAGE13Q4V321 117 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 TRIM68Q6AZZ1 485 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 Q6ZVL8 140 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 ZNF354CQ86Y25 554 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 CCDC33Q8N5R6 958 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 AOPEPQ8N6M6 819 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 PIK3C3Q8NEB9 887 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 PLBD2Q8NHP8 589 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 IL31RAQ8NI17 732 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 BRI3BPQ8WY22 251 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 PDCD2LQ9BRP1 358 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 STAP2Q9UGK3 403 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 CPA4Q9UI42 421 aa5.14□□□□□ -1.59
BRCA1-212ENST00000473961 AJAP1Q9UKB5 411 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-212ENST00000473961 MYOCOSA0A1B0GUC4 107 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 POM121BA6NF01 834 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 LRRC14BA6NHZ5 514 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 ADCY6O43306 1168 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 EIF5BO60841 1220 aaKnown RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 SASH1O94885 1247 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 CYP1A1P04798 512 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 TYRP1P17643 537 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 PAX3P23760 479 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 RPL13P26373 211 aaKnown RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 HALP42357 657 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 TECP42680 631 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 SLC6A9P48067 706 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 MXRA7P84157 204 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 ICA1Q05084 483 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 TARDBPQ13148 414 aaKnown RBP eCLIP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 GRM1Q13255 1194 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 SP140Q13342 867 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 ADAM15Q13444 863 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 SMAD4Q13485 552 aaKnown RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 BIRC3Q13489 604 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 HABP2Q14520 560 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 USP10Q14694 798 aaKnown RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 RALBP1Q15311 655 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 FLYWCH1Q4VC44 716 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 FAM209BQ5JX69 171 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 PGBD2Q6P3X8 592 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 IGDCC3Q8IVU1 814 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 OR6B3Q8NGW1 331 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 FEZF2Q8TBJ5 459 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 IFI44Q8TCB0 444 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 KBTBD7Q8WVZ9 684 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 IPCEF1Q8WWN9 437 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 ARL8AQ96BM9 186 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 MSLNLQ96KJ4 702 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 EIF2AQ9BY44 585 aaKnown RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 WDR12Q9GZL7 423 aaKnown RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 TMEM168Q9H0V1 697 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 OR10A2Q9H208 303 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 NTMQ9P121 344 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 AFF4Q9UHB7 1163 aaKnown RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 ZDHHC8Q9ULC8 765 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 MAGED2Q9UNF1 606 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 SIK3Q9Y2K2 1263 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 KCTD3Q9Y597 815 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 RBM8AQ9Y5S9 174 aaKnown RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 IRAK3Q9Y616 596 aa5.13□□□□□ -1.59
BRCA1-212ENST00000473961 MORC2Q9Y6X9 1032 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-212ENST00000473961 ADAMTS3O15072 1205 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 KLHL18O94889 574 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 FGAP02671 866 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 GNAI2P04899 355 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 VSIG10L2P0DP72 767 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 KITP10721 976 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 MTHFD1P11586 935 aaKnown RBP5.12□□□□□ -1.59
BRCA1-212ENST00000473961 COL6A1P12109 1028 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 ZNF28P17035 718 aa5.12□□□□□ -1.59
BRCA1-212ENST00000473961 EN2P19622 333 aaPredicted RBP5.12□□□□□ -1.59
BRCA1-212ENST00000473961 GUCY1A2P33402 732 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms