RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 DEFB124Q8NES8 71 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 RDM1Q8NG50 284 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 FAM200AQ8TCP9 573 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 CNTNAP5Q8WYK1 1306 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 RABGGTAQ92696 567 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 E2F7Q96AV8 911 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 RIT2Q99578 217 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 DUSP15Q9H1R2 295 aaPredicted RBP11.73□□□□□ -0.53
SSBP1-209ENST00000473783 IL25Q9H293 177 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 SLC32A1Q9H598 525 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 MTRRQ9UBK8 725 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 CELSR3Q9NYQ7 3312 aa11.73□□□□□ -0.53
SSBP1-209ENST00000473783 SPECC1L-ADORA2AF8WAN1 911 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 CDX4O14627 284 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-209ENST00000473783 CHADO15335 359 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 CHMP2AO43633 222 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 GAS7O60861 476 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 STBD1O95210 358 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 KIF4AO95239 1232 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 SEC24BO95487 1268 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 CIITAP33076 1130 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 VIPR2P41587 438 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 PXNP49023 591 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-209ENST00000473783 TUSC3Q13454 348 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 KARSQ15046 597 aaKnown RBP11.72□□□□□ -0.53
SSBP1-209ENST00000473783 JAKMIP3Q5VZ66 844 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 TXNDC11Q6PKC3 985 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-209ENST00000473783 PDZD4Q76G19 769 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-209ENST00000473783 FANCBQ8NB91 859 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 HASPINQ8TF76 798 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 PSPC1Q8WXF1 523 aaKnown RBP11.72□□□□□ -0.53
SSBP1-209ENST00000473783 SLC7A3Q8WY07 619 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 LENG9Q96B70 501 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 TCEAL4Q96EI5 215 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 TMEM87BQ96K49 555 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 CORO1BQ9BR76 489 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 SH2D3AQ9BRG2 576 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 PAAF1Q9BRP4 392 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 TRIM6Q9C030 488 aaPredicted RBP11.72□□□□□ -0.53
SSBP1-209ENST00000473783 CSRNP2Q9H175 543 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 OSBPL3Q9H4L5 887 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 BARHL2Q9NY43 387 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 TAF6LQ9Y6J9 622 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 GON4LQ3T8J9 2241 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 SHROOM3Q8TF72 1996 aa11.72□□□□□ -0.53
SSBP1-209ENST00000473783 ZNF462Q96JM2 2506 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 SH2B2O14492 632 aaPredicted RBP11.71□□□□□ -0.53
SSBP1-209ENST00000473783 KHNYNO15037 678 aaKnown RBP11.71□□□□□ -0.53
SSBP1-209ENST00000473783 TSPAN1O60635 241 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 SRGAP2CP0DJJ0 459 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 RDXP35241 583 aaKnown RBP11.71□□□□□ -0.53
SSBP1-209ENST00000473783 LIFRP42702 1097 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 SOX9P48436 509 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 NCBP1Q09161 790 aaKnown RBP11.71□□□□□ -0.53
SSBP1-209ENST00000473783 FCHO2Q0JRZ9 810 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 C19orf57Q0VDD7 668 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 CYP4A22Q5TCH4 519 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 YAF2Q8IY57 180 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 EXOC8Q8IYI6 725 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 CAMKK1Q8N5S9 505 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 PRPF31Q8WWY3 499 aaKnown RBP11.71□□□□□ -0.53
SSBP1-209ENST00000473783 MKNK1Q9BUB5 465 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 TEKT3Q9BXF9 490 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 LNPKQ9C0E8 428 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 UNC45AQ9H3U1 944 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 NXF3Q9H4D5 531 aaKnown RBP11.71□□□□□ -0.53
SSBP1-209ENST00000473783 CACNG4Q9UBN1 327 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 SLC8A2Q9UPR5 921 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 SLC12A7Q9Y666 1083 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 CDY1Q9Y6F8 540 aa11.71□□□□□ -0.53
SSBP1-209ENST00000473783 KALRNO60229 2985 aa11.71□□□□□ -0.54
SSBP1-209ENST00000473783 NUP210Q8TEM1 1887 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-209ENST00000473783 NCANO14594 1321 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 HEPACAM2A8MVW5 462 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 PRC1O43663 620 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 ATG13O75143 517 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 AKAP5P24588 427 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 CCR2P41597 374 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 SIM1P81133 766 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-209ENST00000473783 LAMTOR4Q0VGL1 99 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 PON2Q15165 354 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 LRCH2Q5VUJ6 765 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 ANO5Q75V66 913 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 MIER3Q7Z3K6 550 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 RNF149Q8NC42 400 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 ZSCAN18Q8TBC5 510 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-209ENST00000473783 ZSWIM3Q96MP5 696 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 BACE2Q9Y5Z0 518 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 TENM4Q6N022 2769 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 HECTD1Q9ULT8 2610 aa11.7□□□□□ -0.54
SSBP1-209ENST00000473783 CASTOR2A6NHX0 329 aa11.69□□□□□ -0.54
SSBP1-209ENST00000473783 DDX11L8A8MPP1 907 aa11.69□□□□□ -0.54
SSBP1-209ENST00000473783 CYSRT1A8MQ03 144 aa11.69□□□□□ -0.54
SSBP1-209ENST00000473783 PRRG1O14668 218 aa11.69□□□□□ -0.54
SSBP1-209ENST00000473783 MSH4O15457 936 aa11.69□□□□□ -0.54
SSBP1-209ENST00000473783 ASAP2O43150 1006 aa11.69□□□□□ -0.54
SSBP1-209ENST00000473783 FGFR3P22607 806 aa11.69□□□□□ -0.54
SSBP1-209ENST00000473783 ELF1P32519 619 aa11.69□□□□□ -0.54
SSBP1-209ENST00000473783 MCM5P33992 734 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms