RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 STPG1Q5TH74 334 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 HEATR6Q6AI08 1181 aaKnown RBP17.99■□□□□ 0.47
HPS4-210ENST00000473782 Q6ZS52 159 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 EXOC8Q8IYI6 725 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 IRF7Q92985 503 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 ARRDC1-AS1Q9H2J1 176 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 ZFP14Q9HCL3 533 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 PARP2Q9UGN5 583 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 NBEAQ8NFP9 2946 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 NID2Q14112 1375 aa17.99■□□□□ 0.47
HPS4-210ENST00000473782 SMG1Q96Q15 3661 aaKnown RBP17.99■□□□□ 0.47
HPS4-210ENST00000473782 GREB1Q4ZG55 1949 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 LAMA5O15230 3695 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 ARHGEF37A1IGU5 675 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 AXIN1O15169 862 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 P4HBP07237 508 aaKnown RBP17.98■□□□□ 0.47
HPS4-210ENST00000473782 GDI1P31150 447 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 NPY5RQ15761 445 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 TSGA10IPQ3SY00 556 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 PLA2G2CQ5R387 149 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 C4orf19Q8IY42 314 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 TCP11Q8WWU5 503 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 TRIM6Q9C030 488 aaPredicted RBP17.98■□□□□ 0.47
HPS4-210ENST00000473782 CDY1Q9Y6F8 540 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 TICRRQ7Z2Z1 1910 aa17.98■□□□□ 0.47
HPS4-210ENST00000473782 WDR27A2RRH5 827 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 TTLL13PA6NNM8 815 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 PTPN2P17706 415 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 PSMC3P17980 439 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 HOXA6P31267 233 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 YWHABP31946 246 aaKnown RBP17.97■□□□□ 0.47
HPS4-210ENST00000473782 VIPR2P41587 438 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 RAP1GAPP47736 663 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 SLC27A1Q6PCB7 646 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.97■□□□□ 0.47
HPS4-210ENST00000473782 SMOC1Q9H4F8 434 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 KCNMB3Q9NPA1 279 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 RGL1Q9NZL6 768 aa17.97■□□□□ 0.47
HPS4-210ENST00000473782 MICAL2O94851 1124 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 GLRA2P23416 452 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 ARL2P36404 184 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 MXD4Q14582 209 aaPredicted RBP17.96■□□□□ 0.47
HPS4-210ENST00000473782 PDXDC1Q6P996 788 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 TXNDC11Q6PKC3 985 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 MOXD1Q6UVY6 613 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 WDR5BQ86VZ2 330 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 HACE1Q8IYU2 909 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 RSPRY1Q96DX4 576 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 MTRQ99707 1265 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 LXNQ9BS40 222 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 NFKBIZQ9BYH8 718 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 BACE2Q9Y5Z0 518 aa17.96■□□□□ 0.47
HPS4-210ENST00000473782 SETXQ7Z333 2677 aaKnown RBP17.96■□□□□ 0.47
HPS4-210ENST00000473782 CCDC196A0A1B0GTZ2 297 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 GIPC1O14908 333 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 ABLIM3O94929 683 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 EPN2O95208 641 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 TOP3BO95985 862 aaKnown RBP17.95■□□□□ 0.46
HPS4-210ENST00000473782 CPA1P15085 419 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 SPINK2P20155 84 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 SOX9P48436 509 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 MLLT6P55198 1093 aaPredicted RBP17.95■□□□□ 0.46
HPS4-210ENST00000473782 SPIRE1Q08AE8 756 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 ELAVL2Q12926 359 aaKnown RBP17.95■□□□□ 0.46
HPS4-210ENST00000473782 PSAPL1Q6NUJ1 521 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 CCDC148Q8NFR7 591 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 HAS1Q92839 578 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 SMARCD2Q92925 531 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 DDX27Q96GQ7 796 aaKnown RBP17.95■□□□□ 0.46
HPS4-210ENST00000473782 CORO1BQ9BR76 489 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 TRPV4Q9HBA0 871 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 ANO2Q9NQ90 1003 aa17.95■□□□□ 0.46
HPS4-210ENST00000473782 TMEM189-UBE2V1I3L0A0 370 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 SEC24AO95486 1093 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 THP07101 528 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 TKTP29401 623 aaKnown RBP17.94■□□□□ 0.46
HPS4-210ENST00000473782 NCBP1Q09161 790 aaKnown RBP17.94■□□□□ 0.46
HPS4-210ENST00000473782 XKR9Q5GH70 373 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 LRSAM1Q6UWE0 723 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 CEP68Q76N32 757 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 KBTBD6Q86V97 674 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 HS6ST3Q8IZP7 471 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 C3orf58Q8NDZ4 430 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 ZNF461Q8TAF7 563 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 LOXL4Q96JB6 756 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 RNF26Q9BY78 433 aaPredicted RBP17.94■□□□□ 0.46
HPS4-210ENST00000473782 SH3GLB2Q9NR46 395 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 SNTG2Q9NY99 539 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 DDX25Q9UHL0 483 aaKnown RBP17.94■□□□□ 0.46
HPS4-210ENST00000473782 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
HPS4-210ENST00000473782 PCDHA4Q9UN74 947 aa17.94■□□□□ 0.46
HPS4-210ENST00000473782 LOC400499M0QZD8 3231 aa17.93■□□□□ 0.46
HPS4-210ENST00000473782 SRRM3A6NNA2 597 aaPredicted RBP17.93■□□□□ 0.46
HPS4-210ENST00000473782 DKC1O60832 514 aaKnown RBP eCLIP17.93■□□□□ 0.46
HPS4-210ENST00000473782 ROR1Q01973 937 aa17.93■□□□□ 0.46
HPS4-210ENST00000473782 CTTNQ14247 550 aaKnown RBP17.93■□□□□ 0.46
HPS4-210ENST00000473782 EPHA7Q15375 998 aa17.93■□□□□ 0.46
HPS4-210ENST00000473782 SLC8B1Q6J4K2 584 aa17.93■□□□□ 0.46
HPS4-210ENST00000473782 MFSD6LQ8IWD5 586 aa17.93■□□□□ 0.46
HPS4-210ENST00000473782 C12orf50Q8NA57 414 aaPredicted RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms