RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 RASA4O43374 803 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 ANKRD20A2Q5SQ80 823 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 ANKRD20A1Q5TYW2 823 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 ANKRD20A3Q5VUR7 823 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 VSIG1Q86XK7 387 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 C12orf56Q8IXR9 622 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 SPDL1Q96EA4 605 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 ZDHHC15Q96MV8 337 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 HERPUD2Q9BSE4 406 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 CCDC189A1A4V9 331 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 ADRB2P07550 413 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 TRAF1Q13077 416 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 ACVR2BQ13705 512 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 STAT4Q14765 748 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 SETDB1Q15047 1291 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 TBC1D10BQ4KMP7 808 aaPredicted RBP15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 GRIPAP1Q4V328 841 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 RBM26Q5T8P6 1007 aaKnown RBP15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 ZNF365Q70YC5 407 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 PHLDB2Q86SQ0 1253 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 MICAL1Q8TDZ2 1067 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 MOV10L1Q9BXT6 1211 aaKnown RBP15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 SIPA1L1O43166 1804 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 IPO5O00410 1097 aaKnown RBP15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 STAT2P52630 851 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 CCDC15Q0P6D6 951 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 MIER3Q7Z3K6 550 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 ANKLE1Q8NAG6 615 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 HEMGNQ9BXL5 484 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 MYLK2Q9H1R3 596 aa15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 R3HDM2Q9Y2K5 976 aaKnown RBP15.17■□□□□ 0.02
NHLRC3-204ENST00000473371 TOM1O60784 492 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 JAG1P78504 1218 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 IZUMO3Q5VZ72 239 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 HAUS6Q7Z4H7 955 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 DHX38Q92620 1227 aaKnown RBP15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 ELMO3Q96BJ8 720 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 NT5C1BQ96P26 610 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 FAM118BQ9BPY3 351 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 LRRC4BQ9NT99 713 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 FAM47DPA6NHR8 397 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 MAPTP10636 758 aaKnown RBP15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 KRT5P13647 590 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 TAF11Q15544 211 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 CYP4F22Q6NT55 531 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 CBWD2Q8IUF1 395 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 KCNQ5Q9NR82 932 aa15.16■□□□□ 0.02
NHLRC3-204ENST00000473371 SPAG7O75391 227 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 WFS1O76024 890 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 CALCAP01258 141 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 PLS3P13797 630 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 RRM1P23921 792 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 CLEC16AQ2KHT3 1053 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 KRT39Q6A163 491 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 PRUNE1Q86TP1 453 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 BBOF1Q8ND07 529 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 HELQQ8TDG4 1101 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 ERP27Q96DN0 273 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 ACTL7BQ9Y614 415 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 CLGNO14967 610 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 VIL1P09327 827 aaKnown RBP15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 GCKP35557 465 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 POLGP54098 1239 aaPredicted RBP15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 WDR4P57081 412 aaKnown RBP15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 SAAL1Q96ER3 474 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 SH2D3AQ9BRG2 576 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 USP20Q9Y2K6 914 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 MAPK13O15264 365 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 PMM2O15305 246 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 ATP5HO75947 161 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 RALAP11233 206 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 CENPCQ03188 943 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 DNAJC3Q13217 504 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 CAPRIN2Q6IMN6 1127 aaKnown RBP15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 CCDC89Q8N998 374 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 UTP4Q969X6 686 aaKnown RBP15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 IDI2Q9BXS1 227 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 ZBTB21Q9ULJ3 1066 aa15.15■□□□□ 0.02
NHLRC3-204ENST00000473371 RBBP6Q7Z6E9 1792 aaKnown RBP15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 BRWD3Q6RI45 1802 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 LTBP1Q14766 1721 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 SLC16A4O15374 487 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 POTEJP0CG39 1038 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 SNRNP35Q16560 246 aaKnown RBP15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 B3GNT9Q6UX72 402 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 TRMT1LQ7Z2T5 733 aaKnown RBP15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 DDX1Q92499 740 aaKnown RBP15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 FAM167BQ9BTA0 163 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 DBNDD1Q9H9R9 158 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 ARHGEF10LQ9HCE6 1279 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 EXOC1LA0A1B0GW35 172 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 TARSP26639 723 aaKnown RBP15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 MAGEA4P43358 317 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 GSTA5Q7RTV2 222 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 RBM15Q96T37 977 aaKnown RBP eCLIP15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 HAO1Q9UJM8 370 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 PHTF1Q9UMS5 762 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 STARD13Q9Y3M8 1113 aa15.14■□□□□ 0.01
NHLRC3-204ENST00000473371 USH1CQ9Y6N9 552 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms