RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 HES2Q9Y543 173 aa29.68■■■□□ 2.34
HOXB3-207ENST00000472863 IL18RAPO95256 599 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 CST3P01034 146 aaPredicted RBP29.67■■■□□ 2.34
HOXB3-207ENST00000472863 SERPING1P05155 500 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 GRM5P41594 1212 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 KYAT1Q16773 422 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 REXO1L1PQ8IX06 675 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 SLC43A3Q8NBI5 491 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 HELQQ8TDG4 1101 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 PHACTR2O75167 634 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 STAT1P42224 750 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 AP3M2P53677 418 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 TRAPPC11Q7Z392 1133 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 CCDC170Q8IYT3 715 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 KREMEN1Q96MU8 473 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 NT5C1BQ96P26 610 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 SNTG2Q9NY99 539 aa29.67■■■□□ 2.34
HOXB3-207ENST00000472863 MROH7Q68CQ1 1323 aa29.66■■■□□ 2.34
HOXB3-207ENST00000472863 A0A0U1RQJ8 604 aa29.66■■■□□ 2.34
HOXB3-207ENST00000472863 FOXN3O00409 490 aaPredicted RBP29.66■■■□□ 2.34
HOXB3-207ENST00000472863 RPS6KA5O75582 802 aa29.66■■■□□ 2.34
HOXB3-207ENST00000472863 GFPT2O94808 682 aa29.66■■■□□ 2.34
HOXB3-207ENST00000472863 NFICP08651 508 aa29.66■■■□□ 2.34
HOXB3-207ENST00000472863 RFX1P22670 979 aa29.66■■■□□ 2.34
HOXB3-207ENST00000472863 SOX5P35711 763 aa29.66■■■□□ 2.34
HOXB3-207ENST00000472863 TRIM71Q2Q1W2 868 aaKnown RBP29.66■■■□□ 2.34
HOXB3-207ENST00000472863 TDRD12Q587J7 1177 aaKnown RBP29.66■■■□□ 2.34
HOXB3-207ENST00000472863 ATRIPQ8WXE1 791 aa29.66■■■□□ 2.34
HOXB3-207ENST00000472863 ST3GAL5Q9UNP4 418 aa29.66■■■□□ 2.34
HOXB3-207ENST00000472863 REXO2Q9Y3B8 237 aaKnown RBP29.66■■■□□ 2.34
HOXB3-207ENST00000472863 DAAM1Q9Y4D1 1078 aa29.66■■■□□ 2.34
HOXB3-207ENST00000472863 RPLP2P05387 115 aaKnown RBP29.65■■■□□ 2.34
HOXB3-207ENST00000472863 CCDC175P0C221 793 aa29.65■■■□□ 2.34
HOXB3-207ENST00000472863 POU5F1Q01860 360 aaKnown RBP29.65■■■□□ 2.34
HOXB3-207ENST00000472863 KLHL30Q0D2K2 578 aa29.65■■■□□ 2.34
HOXB3-207ENST00000472863 UBXN11Q5T124 520 aa29.65■■■□□ 2.34
HOXB3-207ENST00000472863 JADE1Q6IE81 842 aa29.65■■■□□ 2.34
HOXB3-207ENST00000472863 SPOPLQ6IQ16 392 aa29.65■■■□□ 2.34
HOXB3-207ENST00000472863 TMEM130Q8N3G9 435 aa29.65■■■□□ 2.34
HOXB3-207ENST00000472863 CXCL16Q9H2A7 254 aa29.65■■■□□ 2.34
HOXB3-207ENST00000472863 HAUS4Q9H6D7 363 aa29.65■■■□□ 2.34
HOXB3-207ENST00000472863 A0A0U1RQG5 324 aaPredicted RBP29.65■■■□□ 2.34
HOXB3-207ENST00000472863 DNM1LO00429 736 aa29.65■■■□□ 2.34
HOXB3-207ENST00000472863 NFX1Q12986 1120 aaKnown RBP29.65■■■□□ 2.34
HOXB3-207ENST00000472863 NCOA4Q13772 614 aa29.65■■■□□ 2.34
HOXB3-207ENST00000472863 APBB1IPQ7Z5R6 666 aaPredicted RBP29.65■■■□□ 2.34
HOXB3-207ENST00000472863 CCDC94Q9BW85 323 aaPredicted RBP29.65■■■□□ 2.34
HOXB3-207ENST00000472863 TRIM6Q9C030 488 aaPredicted RBP29.65■■■□□ 2.34
HOXB3-207ENST00000472863 NXF3Q9H4D5 531 aaKnown RBP29.65■■■□□ 2.34
HOXB3-207ENST00000472863 AGO3Q9H9G7 860 aaKnown RBP29.65■■■□□ 2.34
HOXB3-207ENST00000472863 ARVCFO00192 962 aa29.64■■■□□ 2.34
HOXB3-207ENST00000472863 ZSCAN12O43309 604 aa29.64■■■□□ 2.34
HOXB3-207ENST00000472863 TMEM191BP0C7N4 346 aa29.64■■■□□ 2.34
HOXB3-207ENST00000472863 CYLC1P35663 651 aaPredicted RBP29.64■■■□□ 2.34
HOXB3-207ENST00000472863 ASTE1Q2TB18 679 aaPredicted RBP29.64■■■□□ 2.34
HOXB3-207ENST00000472863 DEF6Q9H4E7 631 aa29.64■■■□□ 2.34
HOXB3-207ENST00000472863 ASB7Q9H672 318 aa29.64■■■□□ 2.34
HOXB3-207ENST00000472863 ZC3H11AO75152 810 aaKnown RBP eCLIP29.63■■■□□ 2.33
HOXB3-207ENST00000472863 MAPK8IP2Q13387 824 aaPredicted RBP29.63■■■□□ 2.33
HOXB3-207ENST00000472863 WDR44Q5JSH3 913 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 C16orf45Q96MC5 204 aaPredicted RBP29.63■■■□□ 2.33
HOXB3-207ENST00000472863 APOBEC3GQ9HC16 384 aaKnown RBP29.63■■■□□ 2.33
HOXB3-207ENST00000472863 OGDHLQ9ULD0 1010 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 SSU72P8A0A1W2PR75 194 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 ZNF263O14978 683 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 EVI5O60447 810 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 CLCN1P35523 988 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 KIF11P52732 1056 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 MFAP3P55082 362 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 CYP27A1Q02318 531 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 PTK2Q05397 1052 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 ANKRD36BP1Q96IX9 119 aa29.63■■■□□ 2.33
HOXB3-207ENST00000472863 EIF3CLB5ME19 914 aaKnown RBP29.62■■■□□ 2.33
HOXB3-207ENST00000472863 ZNF618Q5T7W0 954 aa29.62■■■□□ 2.33
HOXB3-207ENST00000472863 EIF3CQ99613 913 aaKnown RBP29.62■■■□□ 2.33
HOXB3-207ENST00000472863 APOL6Q9BWW8 343 aa29.62■■■□□ 2.33
HOXB3-207ENST00000472863 CITO14578 2027 aa29.62■■■□□ 2.33
HOXB3-207ENST00000472863 CCP110O43303 1012 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 AKR1B10O60218 316 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 TNNC2P02585 160 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 FERP16591 822 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 AKAP5P24588 427 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 PRKCIP41743 596 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 MYL6P60660 151 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 FBXO47Q5MNV8 452 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 TWF2Q6IBS0 349 aaKnown RBP29.61■■■□□ 2.33
HOXB3-207ENST00000472863 ZNF571Q7Z3V5 609 aaPredicted RBP29.61■■■□□ 2.33
HOXB3-207ENST00000472863 C1orf112Q9NSG2 853 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 GHRP10912 638 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 HSPA8P11142 646 aaKnown RBP29.61■■■□□ 2.33
HOXB3-207ENST00000472863 GFPT1Q06210 699 aaPredicted RBP29.61■■■□□ 2.33
HOXB3-207ENST00000472863 ARID3AQ99856 593 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 RNF39Q9H2S5 420 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 TRIP11Q15643 1979 aa29.61■■■□□ 2.33
HOXB3-207ENST00000472863 CTU1Q7Z7A3 348 aaKnown RBP29.6■■■□□ 2.33
HOXB3-207ENST00000472863 TFR2Q9UP52 801 aa29.6■■■□□ 2.33
HOXB3-207ENST00000472863 NUB1Q9Y5A7 615 aa29.6■■■□□ 2.33
HOXB3-207ENST00000472863 BZW2Q9Y6E2 419 aaKnown RBP29.6■■■□□ 2.33
HOXB3-207ENST00000472863 CKBP12277 381 aa29.59■■■□□ 2.33
HOXB3-207ENST00000472863 CD52P31358 61 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms