RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 NUAK1O60285 661 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 ICAM1P05362 532 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 IFNGR1P15260 489 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 CSF2RAP15509 400 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 ATP2A2P16615 1042 aaKnown RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 POU3F3P20264 500 aaPredicted RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 PLA2G5P39877 138 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 KIR2DL1P43626 348 aaPredicted RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 KIR2DL2P43627 348 aaPredicted RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 PCBP3P57721 371 aaKnown RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 LINC00310P59036 64 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 TRAF1Q13077 416 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 DUSP28Q4G0W2 176 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 CCDC178Q5BJE1 867 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 KIAA1755Q5JYT7 1200 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 GPATCH4Q5T3I0 446 aaKnown RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 NFRKBQ6P4R8 1299 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 ZNF365Q70YC5 407 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 SIAH1Q8IUQ4 282 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 LILRA2Q8N149 483 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 LRRC47Q8N1G4 583 aaKnown RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 ARHGEF39Q8N4T4 335 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 FIBCD1Q8N539 461 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 ANKS4BQ8N8V4 417 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 DNERQ8NFT8 737 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 CAGE1Q8TC20 777 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 PANK1Q8TE04 598 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 AFAP1L1Q8TED9 768 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 DHX38Q92620 1227 aaKnown RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 FAM122AQ96E09 287 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 FCRL2Q96LA5 508 aaPredicted RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 MTG1Q9BT17 334 aaPredicted RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 FSD1Q9BTV5 496 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 PUS7LQ9H0K6 701 aaKnown RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 SLC6A17Q9H1V8 727 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 ALDH8A1Q9H2A2 487 aaPredicted RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 RNF41Q9H4P4 317 aaPredicted RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 CAPN10Q9HC96 672 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 RAVER2Q9HCJ3 691 aaKnown RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 A1CFQ9NQ94 594 aaKnown RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 CYP39A1Q9NYL5 469 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 FBLN5Q9UBX5 448 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 ZMYM5Q9UJ78 669 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 CCPG1Q9ULG6 757 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 STRIP2Q9ULQ0 834 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 TNNQ9UQP3 1299 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 FAM50BQ9Y247 325 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 YBX2Q9Y2T7 364 aaKnown RBP4.09□□□□□ -1.75
XRN1-209ENST00000472625 ZMYM6O95789 1325 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 WDR19Q8NEZ3 1342 aa4.09□□□□□ -1.75
XRN1-209ENST00000472625 CHD7Q9P2D1 2997 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 CYP2D7A0A087X1C5 515 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 FGF10O15520 208 aaPredicted RBP4.08□□□□□ -1.76
XRN1-209ENST00000472625 TBX1O43435 398 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 KLF4O43474 513 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 ORC4O43929 436 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 B4GALT4O60513 344 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 PPP1R11O60927 126 aaPredicted RBP4.08□□□□□ -1.76
XRN1-209ENST00000472625 PRDM1O75626 825 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 GSNP06396 782 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 INHBBP09529 407 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 MSL3P1P0C860 447 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 MED14OSP0DP75 135 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 TOP1P11387 765 aaKnown RBP4.08□□□□□ -1.76
XRN1-209ENST00000472625 ALAS1P13196 640 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 GLDCP23378 1020 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 ITGB8P26012 769 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 CYP2C18P33260 490 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 EPHB4P54760 987 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 TFAP4Q01664 338 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 PPARAQ07869 468 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 DUSP4Q13115 394 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 CCDC96Q2M329 555 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 CHD9Q3L8U1 2897 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 HSF5Q4G112 596 aaPredicted RBP4.08□□□□□ -1.76
XRN1-209ENST00000472625 ADGRF1Q5T601 910 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 CXCL17Q6UXB2 119 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 NSMFQ6X4W1 530 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 OTOP2Q7RTS6 562 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 EMSYQ7Z589 1322 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 FBXO16Q8IX29 292 aaPredicted RBP4.08□□□□□ -1.76
XRN1-209ENST00000472625 IFNL3Q8IZI9 196 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 CELF2-AS1Q8N7Q2 184 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 OR6J1Q8NGC5 347 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 MORC4Q8TE76 937 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 ANAPC16Q96DE5 110 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 FGD4Q96M96 766 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 JMJD8Q96S16 334 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 NUP88Q99567 741 aaPredicted RBP4.08□□□□□ -1.76
XRN1-209ENST00000472625 WDR11Q9BZH6 1224 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 KATNBL1Q9H079 304 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 RANBP17Q9H2T7 1088 aaKnown RBP4.08□□□□□ -1.76
XRN1-209ENST00000472625 PRDM12Q9H4Q4 367 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 GCM1Q9NP62 436 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 CGGBP1Q9UFW8 167 aaPredicted RBP4.08□□□□□ -1.76
XRN1-209ENST00000472625 CTNNA3Q9UI47 895 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 RCAN3Q9UKA8 241 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 FBXL21Q9UKT6 434 aa4.08□□□□□ -1.76
XRN1-209ENST00000472625 GPR55Q9Y2T6 319 aaPredicted RBP4.08□□□□□ -1.76
XRN1-209ENST00000472625 RIPK3Q9Y572 518 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms