RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 PPP2R3CQ969Q6 453 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 CPB2Q96IY4 423 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 VN1R3Q9BXE9 311 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 INO80BQ9C086 356 aaPredicted RBP10.06□□□□□ -0.8
SMC4-213ENST00000472282 GOLPH3LQ9H4A5 285 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 MUTYHQ9UIF7 546 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 KCNH3Q9ULD8 1083 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 FAM50BQ9Y247 325 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 PCDHB2Q9Y5E7 798 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 TECTAO75443 2155 aa10.06□□□□□ -0.8
SMC4-213ENST00000472282 PDCD11Q14690 1871 aaKnown RBP10.06□□□□□ -0.8
SMC4-213ENST00000472282 VWA8A3KMH1 1905 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 C2orf71A6NGG8 1288 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 LRRIQ4A6NIV6 560 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 CFAP99D6REC4 459 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 POLR2DO15514 142 aaKnown RBP10.05□□□□□ -0.8
SMC4-213ENST00000472282 ASAP2O43150 1006 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 DCXO43602 365 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 TSPAN1O60635 241 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 KRT18P05783 430 aaKnown RBP10.05□□□□□ -0.8
SMC4-213ENST00000472282 GALTP07902 379 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 PPM1AP35813 382 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 SLC11A1P49279 550 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 PTENP60484 403 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 TFDP1Q14186 410 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 ARSHQ5FYA8 562 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 NOMO2Q5JPE7 1267 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 ANKRD54Q6NXT1 300 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 KANK3Q6NY19 840 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 TMEM184AQ6ZMB5 413 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 SV2BQ7L1I2 683 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 TMC7Q7Z402 723 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 MRPL10Q7Z7H8 261 aaKnown RBP10.05□□□□□ -0.8
SMC4-213ENST00000472282 CDR2LQ86X02 465 aaPredicted RBP10.05□□□□□ -0.8
SMC4-213ENST00000472282 ARMC2Q8NEN0 867 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 SUSD6Q92537 303 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 STAMQ92783 540 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 KIFAP3Q92845 792 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 REEP2Q9BRK0 252 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 EIF2AQ9BY44 585 aaKnown RBP10.05□□□□□ -0.8
SMC4-213ENST00000472282 MRPL9Q9BYD2 267 aaKnown RBP10.05□□□□□ -0.8
SMC4-213ENST00000472282 GBP3Q9H0R5 595 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 ZBP1Q9H171 429 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 S1PR5Q9H228 398 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 KCND2Q9NZV8 630 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 PUF60Q9UHX1 559 aaKnown RBP10.05□□□□□ -0.8
SMC4-213ENST00000472282 HPSEQ9Y251 543 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 HES2Q9Y543 173 aa10.05□□□□□ -0.8
SMC4-213ENST00000472282 ANK1P16157 1881 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 FAM237AA0A1B0GTK4 181 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 GOLGA6L4A6NEF3 574 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 MYMKA6NI61 221 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 SFI1A8K8P3 1242 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 LOC730098B7Z3J9 87 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 H3BM21 787 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 B4GALT5O43286 388 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 CLASP2O75122 1294 aaKnown RBP10.04□□□□□ -0.8
SMC4-213ENST00000472282 POMCP01189 267 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 TIMP2P16035 220 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 NAMPTP43490 491 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 RAB27AP51159 221 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 NDUFA8P51970 172 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 KRT17Q04695 432 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 MBTD1Q05BQ5 628 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 ARID5BQ14865 1188 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 PPP2R5AQ15172 486 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 PDE12Q6L8Q7 609 aaKnown RBP10.04□□□□□ -0.8
SMC4-213ENST00000472282 GLB1LQ6UWU2 654 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 DYMQ7RTS9 669 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 BPHLQ86WA6 291 aaPredicted RBP10.04□□□□□ -0.8
SMC4-213ENST00000472282 VPS52Q8N1B4 723 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 MRPL43Q8N983 215 aaKnown RBP10.04□□□□□ -0.8
SMC4-213ENST00000472282 IQUBQ8NA54 791 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 IGSF21Q96ID5 467 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 IFT74Q96LB3 600 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 DRC1Q96MC2 740 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 CDK15Q96Q40 435 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 CDCA3Q99618 268 aaPredicted RBP10.04□□□□□ -0.8
SMC4-213ENST00000472282 KIFC3Q9BVG8 833 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 TIPINQ9BVW5 301 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 TNMDQ9H2S6 317 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 CUEDC2Q9H467 287 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 RSAD1Q9HA92 442 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 NGRNQ9NPE2 291 aaKnown RBP10.04□□□□□ -0.8
SMC4-213ENST00000472282 MIOSQ9NXC5 875 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 SERTAD1Q9UHV2 236 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 ODF2LQ9ULJ1 636 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 IPPQ9Y573 584 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 HCFC2Q9Y5Z7 792 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 DOCK6Q96HP0 2047 aa10.04□□□□□ -0.8
SMC4-213ENST00000472282 ZNF318Q5VUA4 2279 aa10.03□□□□□ -0.8
SMC4-213ENST00000472282 PRR33A8MZF0 331 aa10.03□□□□□ -0.8
SMC4-213ENST00000472282 F8W810 466 aa10.03□□□□□ -0.8
SMC4-213ENST00000472282 INO80B-WBP1J3KQ70 363 aa10.03□□□□□ -0.8
SMC4-213ENST00000472282 GADD45BO75293 160 aaPredicted RBP10.03□□□□□ -0.8
SMC4-213ENST00000472282 TBCAO75347 108 aaKnown RBP10.03□□□□□ -0.8
SMC4-213ENST00000472282 FAM13AO94988 1023 aa10.03□□□□□ -0.8
SMC4-213ENST00000472282 CXCL14O95715 111 aa10.03□□□□□ -0.8
SMC4-213ENST00000472282 F12P00748 615 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms