RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 COL19A1Q14993 1142 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 TIGD5Q53EQ6 642 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 ZBTB41Q5SVQ8 909 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 ADGRD2Q7Z7M1 963 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 CCDC65Q8IXS2 484 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 FSIP1Q8NA03 581 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 SLC17A8Q8NDX2 589 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 HVCN1Q96D96 273 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 PAGE5Q96GU1 130 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 PPP1R10Q96QC0 940 aaKnown RBP13.54□□□□□ -0.24
LINC00888-202ENST00000471496 TCHPQ9BT92 498 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 CACNG4Q9UBN1 327 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 STYXL1Q9Y6J8 313 aa13.54□□□□□ -0.24
LINC00888-202ENST00000471496 HNRNPDLO14979 420 aaKnown RBP13.53□□□□□ -0.24
LINC00888-202ENST00000471496 CLDN3O15551 220 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 CSPG5O95196 566 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 HARSP12081 509 aaKnown RBP13.53□□□□□ -0.24
LINC00888-202ENST00000471496 ADSSP30520 456 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 ABCD1P33897 745 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 HOXD13P35453 343 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 SYKP43405 635 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 LIG4P49917 911 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 ASIC1P78348 528 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 SLC10A6Q3KNW5 377 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 L1TD1Q5T7N2 865 aaKnown RBP13.53□□□□□ -0.24
LINC00888-202ENST00000471496 UNC13DQ70J99 1090 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 EPM2AIP1Q7L775 607 aaPredicted RBP13.53□□□□□ -0.24
LINC00888-202ENST00000471496 APBB1IPQ7Z5R6 666 aaPredicted RBP13.53□□□□□ -0.24
LINC00888-202ENST00000471496 RNF168Q8IYW5 571 aaPredicted RBP13.53□□□□□ -0.24
LINC00888-202ENST00000471496 BICD1Q96G01 975 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 SNX27Q96L92 541 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 ZMAT2Q96NC0 199 aaKnown RBP13.53□□□□□ -0.24
LINC00888-202ENST00000471496 PAAF1Q9BRP4 392 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 CCDC94Q9BW85 323 aaPredicted RBP13.53□□□□□ -0.24
LINC00888-202ENST00000471496 NSUN3Q9H649 340 aaKnown RBP13.53□□□□□ -0.24
LINC00888-202ENST00000471496 TLR9Q9NR96 1032 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 USP25Q9UHP3 1055 aa13.53□□□□□ -0.24
LINC00888-202ENST00000471496 VWA8A3KMH1 1905 aa13.52□□□□□ -0.24
LINC00888-202ENST00000471496 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 GCNT3O95395 438 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 ALDH2P05091 517 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 THP07101 528 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 GTF2F1P35269 517 aaKnown RBP eCLIP13.52□□□□□ -0.25
LINC00888-202ENST00000471496 TNFSF9P41273 254 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 HYAL1Q12794 435 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 TUSC3Q13454 348 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 GLRA4Q5JXX5 417 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 DDX53Q86TM3 631 aaKnown RBP13.52□□□□□ -0.25
LINC00888-202ENST00000471496 CEP57L1Q8IYX8 460 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 RABGGTAQ92696 567 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 ACAP3Q96P50 834 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 FAM193BQ96PV7 902 aaPredicted RBP13.52□□□□□ -0.25
LINC00888-202ENST00000471496 RPS6KC1Q96S38 1066 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 IL21Q9HBE4 155 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 CHMP5Q9NZZ3 219 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.25
LINC00888-202ENST00000471496 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.51□□□□□ -0.25
LINC00888-202ENST00000471496 PVALEFA0A1B0GWK0 134 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 CARNS1A5YM72 827 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 OGTO15294 1046 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 PRPF6O94906 941 aaKnown RBP13.51□□□□□ -0.25
LINC00888-202ENST00000471496 ZNF202O95125 648 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 ADRB2P07550 413 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 KCNE1P15382 129 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 IGFBP6P24592 240 aaPredicted RBP13.51□□□□□ -0.25
LINC00888-202ENST00000471496 OR1G1P47890 313 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 KRT17Q04695 432 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 SOX4Q06945 474 aaPredicted RBP13.51□□□□□ -0.25
LINC00888-202ENST00000471496 TJAP1Q5JTD0 557 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 KRBA2Q6ZNG9 492 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 FMR1NBQ8N0W7 255 aaPredicted RBP13.51□□□□□ -0.25
LINC00888-202ENST00000471496 ENGASEQ8NFI3 743 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 TMEM169Q96HH4 297 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 ZBP1Q9H171 429 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 CNTN3Q9P232 1028 aa13.51□□□□□ -0.25
LINC00888-202ENST00000471496 PRG3Q9Y2Y8 225 aaPredicted RBP13.51□□□□□ -0.25
LINC00888-202ENST00000471496 TTC26A0AVF1 554 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 HIDE1A8MVS5 230 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 CLTAP09496 248 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 CXCL8P10145 99 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 SNW1Q13573 536 aaKnown RBP13.5□□□□□ -0.25
LINC00888-202ENST00000471496 ALCAMQ13740 583 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 ENOX2Q16206 610 aaKnown RBP13.5□□□□□ -0.25
LINC00888-202ENST00000471496 CTC1Q2NKJ3 1217 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 FAM26FQ5R3K3 315 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 PDE12Q6L8Q7 609 aaKnown RBP13.5□□□□□ -0.25
LINC00888-202ENST00000471496 CD300LGQ6UXG3 332 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 CRELD2Q6UXH1 353 aaPredicted RBP13.5□□□□□ -0.25
LINC00888-202ENST00000471496 TAS1R1Q7RTX1 841 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 VPS52Q8N1B4 723 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 ACCSQ96QU6 501 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 TCF25Q9BQ70 676 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 MSTO1Q9BUK6 570 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 TOPORSQ9NS56 1045 aaPredicted RBP13.5□□□□□ -0.25
LINC00888-202ENST00000471496 PUF60Q9UHX1 559 aaKnown RBP13.5□□□□□ -0.25
LINC00888-202ENST00000471496 CPSF3Q9UKF6 684 aaKnown RBP13.5□□□□□ -0.25
LINC00888-202ENST00000471496 C5orf42Q9H799 3197 aa13.5□□□□□ -0.25
LINC00888-202ENST00000471496 CASTOR2A6NHX0 329 aa13.49□□□□□ -0.25
LINC00888-202ENST00000471496 CTSAP10619 480 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms