RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 RGL1Q9NZL6 768 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 DDX25Q9UHL0 483 aaKnown RBP7.62□□□□□ -1.19
HDAC1-204ENST00000471488 FRYQ5TBA9 3013 aa7.62□□□□□ -1.19
HDAC1-204ENST00000471488 TICRRQ7Z2Z1 1910 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 NRG2O14511 850 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-204ENST00000471488 DPYSL4O14531 572 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 ZNF197O14709 1029 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 TBX3O15119 743 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 EFEMP2O95967 443 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 C1RP00736 705 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 CHRNB1P11230 501 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 MPLP40238 635 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 PTENP60484 403 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 CCT2P78371 535 aaKnown RBP7.61□□□□□ -1.19
HDAC1-204ENST00000471488 SHC2P98077 582 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 CREB5Q02930 508 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 MBTD1Q05BQ5 628 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 ELAVL2Q12926 359 aaKnown RBP7.61□□□□□ -1.19
HDAC1-204ENST00000471488 CAPSQ13938 189 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 RAB33AQ14088 237 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 GAS6Q14393 721 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 MXD4Q14582 209 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-204ENST00000471488 PON2Q15165 354 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 INF2Q27J81 1249 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 UVSSAQ2YD98 709 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 UAP1L1Q3KQV9 507 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 ADCK5Q3MIX3 580 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 Q4G0T1 1027 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 VITQ6UXI7 678 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-204ENST00000471488 CACNA2D4Q7Z3S7 1137 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 NOSTRINQ8IVI9 506 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 HS6ST3Q8IZP7 471 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 GSTCDQ8NEC7 633 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 TTC16Q8NEE8 873 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 ZSCAN18Q8TBC5 510 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-204ENST00000471488 ASAP3Q8TDY4 903 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 BRF1Q92994 677 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 COL26A1Q96A83 441 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 ZFYVE19Q96K21 471 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 ZNF512Q96ME7 567 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-204ENST00000471488 ZSWIM3Q96MP5 696 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 IER2Q9BTL4 223 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 EDEM2Q9BV94 578 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 ADAM33Q9BZ11 813 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 DHX33Q9H6R0 707 aaKnown RBP7.61□□□□□ -1.19
HDAC1-204ENST00000471488 C2orf42Q9NWW7 574 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 WRAP73Q9P2S5 460 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-204ENST00000471488 CIZ1Q9ULV3 898 aaPredicted RBP7.61□□□□□ -1.19
HDAC1-204ENST00000471488 SLC8A2Q9UPR5 921 aa7.61□□□□□ -1.19
HDAC1-204ENST00000471488 A0A087WWV3 80 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 WDR27A2RRH5 827 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 SHISA7A6NL88 538 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 SRRM3A6NNA2 597 aaPredicted RBP7.6□□□□□ -1.19
HDAC1-204ENST00000471488 C4orf47A7E2U8 309 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 SOBPA7XYQ1 873 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 HEPACAM2A8MVW5 462 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 K7ESF4 209 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 PRPF3O43395 683 aaKnown RBP7.6□□□□□ -1.19
HDAC1-204ENST00000471488 SLC37A4O43826 429 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 EXTL3O43909 919 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 CCNT1O60563 726 aaKnown RBP7.6□□□□□ -1.19
HDAC1-204ENST00000471488 USO1O60763 962 aaKnown RBP7.6□□□□□ -1.19
HDAC1-204ENST00000471488 RECQL4O94761 1208 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 P4HBP07237 508 aaKnown RBP7.6□□□□□ -1.19
HDAC1-204ENST00000471488 ZNF806P0C7X5 589 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 FCARP24071 287 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 IGFBP6P24592 240 aaPredicted RBP7.6□□□□□ -1.19
HDAC1-204ENST00000471488 GBP1P32455 592 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 CCR2P41597 374 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 BRCC3P46736 316 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 CLCNKBP51801 687 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 RING1Q06587 406 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 PTGDRQ13258 359 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 TEAD2Q15562 447 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 SH3PXD2AQ5TCZ1 1133 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 POTEHQ6S545 545 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 LRSAM1Q6UWE0 723 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 Q6ZUG5 572 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 WDR5BQ86VZ2 330 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 SMARCD2Q92925 531 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 ASB16Q96NS5 453 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 ADPGKQ9BRR6 497 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 ESYT1Q9BSJ8 1104 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 SCNM1Q9BWG6 230 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 LSM14BQ9BX40 385 aaKnown RBP7.6□□□□□ -1.19
HDAC1-204ENST00000471488 POLR3FQ9H1D9 316 aaPredicted RBP7.6□□□□□ -1.19
HDAC1-204ENST00000471488 CXCL16Q9H2A7 254 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 GOLGA2P5Q9HBQ8 144 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 NCOA5Q9HCD5 579 aaKnown RBP7.6□□□□□ -1.19
HDAC1-204ENST00000471488 ASAH2Q9NR71 780 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 MTRRQ9UBK8 725 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 INVSQ9Y283 1065 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 USP20Q9Y2K6 914 aa7.6□□□□□ -1.19
HDAC1-204ENST00000471488 FAM208BQ5VWN6 2430 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 EIF4E1BA6NMX2 242 aaKnown RBP7.59□□□□□ -1.19
HDAC1-204ENST00000471488 SPECC1L-ADORA2AF8WAN1 911 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 PTGESO14684 152 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 TRAPPC3O43617 180 aa7.59□□□□□ -1.19
HDAC1-204ENST00000471488 EDIL3O43854 480 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms