RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 RFC2P35250 354 aa18.89■□□□□ 0.62
HSPG2-208ENST00000471322 GTF2F1P35269 517 aaKnown RBP eCLIP18.89■□□□□ 0.62
HSPG2-208ENST00000471322 STAT1P42224 750 aa18.89■□□□□ 0.62
HSPG2-208ENST00000471322 VAV2P52735 878 aa18.89■□□□□ 0.62
HSPG2-208ENST00000471322 CYP24A1Q07973 514 aa18.89■□□□□ 0.62
HSPG2-208ENST00000471322 MGAT3Q09327 533 aa18.89■□□□□ 0.62
HSPG2-208ENST00000471322 KIF5AQ12840 1032 aa18.89■□□□□ 0.62
HSPG2-208ENST00000471322 ASTE1Q2TB18 679 aaPredicted RBP18.89■□□□□ 0.62
HSPG2-208ENST00000471322 SAAL1Q96ER3 474 aa18.89■□□□□ 0.62
HSPG2-208ENST00000471322 APEX2Q9UBZ4 518 aa18.89■□□□□ 0.62
HSPG2-208ENST00000471322 CHD7Q9P2D1 2997 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 CHD9Q3L8U1 2897 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 UQCRHLA0A096LP55 91 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 CAND2O75155 1236 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 ADRB2P07550 413 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 UQCRHP07919 91 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 PLEKP08567 350 aaPredicted RBP18.89■□□□□ 0.61
HSPG2-208ENST00000471322 FERP16591 822 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 PRKCIP41743 596 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 MXI1P50539 228 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 JAM2P57087 298 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 DLG4P78352 724 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 APBA1Q02410 837 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 POU5F1BQ06416 359 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 PPP3CAQ08209 521 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 MKRN4PQ13434 485 aaPredicted RBP18.89■□□□□ 0.61
HSPG2-208ENST00000471322 C1orf220Q5T0J3 134 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 KRT39Q6A163 491 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 FAM109BQ6ICB4 259 aaPredicted RBP18.89■□□□□ 0.61
HSPG2-208ENST00000471322 IQCEQ6IPM2 695 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 RPAINQ86UA6 219 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 DBF4BQ8NFT6 615 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 JAKMIP2Q96AA8 810 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 MRPL4Q9BYD3 311 aaKnown RBP18.89■□□□□ 0.61
HSPG2-208ENST00000471322 L2HGDHQ9H9P8 463 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 TMEM8AQ9HCN3 771 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 AGO2Q9UKV8 859 aaKnown RBP18.89■□□□□ 0.61
HSPG2-208ENST00000471322 PCDHA13Q9Y5I0 950 aa18.89■□□□□ 0.61
HSPG2-208ENST00000471322 M0QZ92 97 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 SOX1O00570 391 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-208ENST00000471322 TMOD1P28289 359 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 GCLMP48507 274 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 LPIN1Q14693 890 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 MAPK6Q16659 721 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 EPC2Q52LR7 807 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 FAM26DQ5JW98 314 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 CCDC122Q5T0U0 273 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 IRF2BP2Q7Z5L9 587 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 VPS36Q86VN1 386 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 FAM213AQ9BRX8 229 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 IFIH1Q9BYX4 1025 aaKnown RBP18.88■□□□□ 0.61
HSPG2-208ENST00000471322 CELF4Q9BZC1 486 aaKnown RBP18.88■□□□□ 0.61
HSPG2-208ENST00000471322 DNAJC12Q9UKB3 198 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 TRPV2Q9Y5S1 764 aa18.88■□□□□ 0.61
HSPG2-208ENST00000471322 A0A0B4J269 797 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 GRXCR1A8MXD5 290 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 CXCL10P02778 98 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 SRGAP2CP0DJJ0 459 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 NLRP11P59045 1033 aaKnown RBP18.87■□□□□ 0.61
HSPG2-208ENST00000471322 TUBB2AQ13885 445 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 ZNF569Q5MCW4 686 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 C10orf76Q5T2E6 689 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 LINC01465Q8N7H1 131 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 RNF149Q8NC42 400 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 ZSWIM2Q8NEG5 633 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 LMO3Q8TAP4 145 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 PLEKHO2Q8TD55 490 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 TMEM40Q8WWA1 233 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 CCDC127Q96BQ5 260 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 LRCH3Q96II8 777 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 WDR24Q96S15 920 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 MAP7D2Q96T17 732 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 OSMRQ99650 979 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 TUBB2BQ9BVA1 445 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 TARS2Q9BW92 718 aaKnown RBP18.87■□□□□ 0.61
HSPG2-208ENST00000471322 NFKBIZQ9BYH8 718 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 TMEM117Q9H0C3 514 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 AGO3Q9H9G7 860 aaKnown RBP18.87■□□□□ 0.61
HSPG2-208ENST00000471322 COQ4Q9Y3A0 265 aa18.87■□□□□ 0.61
HSPG2-208ENST00000471322 TOM1L1O75674 476 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 GFPT2O94808 682 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 PFKMP08237 780 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 CD52P31358 61 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 MAGEA1P43355 309 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 PSMD6Q15008 389 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 SLC18A3Q16572 532 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 FBXO47Q5MNV8 452 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 TMCO2Q7Z6W1 182 aaPredicted RBP18.86■□□□□ 0.61
HSPG2-208ENST00000471322 RHPN2Q8IUC4 686 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 NME8Q8N427 588 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 HERVK_113Q902F9 699 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 SCLT1Q96NL6 688 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 MSTO1Q9BUK6 570 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 CCDC113Q9H0I3 377 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 SIP14410 1827 aa18.86■□□□□ 0.61
HSPG2-208ENST00000471322 A0A1W2PPC1 479 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 LRRIQ3A6PVS8 624 aaPredicted RBP18.85■□□□□ 0.61
HSPG2-208ENST00000471322 CLDN3O15551 220 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 GPR32O75388 356 aa18.85■□□□□ 0.61
HSPG2-208ENST00000471322 CSDE1O75534 798 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms