RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ATP2B3Q16720 1220 aa7.46□□□□□ -1.22
CCDC39-202ENST00000471307 SYDE2Q5VT97 1194 aa7.46□□□□□ -1.22
CCDC39-202ENST00000471307 MED25Q71SY5 747 aa7.46□□□□□ -1.22
CCDC39-202ENST00000471307 C1orf162Q8NEQ5 155 aaPredicted RBP7.46□□□□□ -1.22
CCDC39-202ENST00000471307 FBXO18Q8NFZ0 1043 aa7.46□□□□□ -1.22
CCDC39-202ENST00000471307 OR56A1Q8NGH5 318 aa7.46□□□□□ -1.22
CCDC39-202ENST00000471307 TEX101Q9BY14 249 aa7.46□□□□□ -1.22
CCDC39-202ENST00000471307 LPXNO60711 386 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 CDK11BP21127 795 aaKnown RBP7.45□□□□□ -1.22
CCDC39-202ENST00000471307 TGM1P22735 817 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 USP14P54578 494 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 MTM1Q13496 603 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 CLUL1Q15846 466 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 ABHD17BQ5VST6 288 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 PGM2L1Q6PCE3 622 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 OR2I1PQ8NGU4 316 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 STON2Q8WXE9 905 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 COQ10AQ96MF6 247 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 SLC2A13Q96QE2 648 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 RNPEPQ9H4A4 650 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 KLHL11Q9NVR0 708 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 MKS1Q9NXB0 559 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 SLC23A1Q9UHI7 598 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 PEG3Q9GZU2 1588 aa7.45□□□□□ -1.22
CCDC39-202ENST00000471307 ALG1L2C9J202 215 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 FPR1P21462 350 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 PROZP22891 400 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 GCSHP23434 173 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 PCSK1P29120 753 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 SLC16A1P53985 500 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 ATP8B2P98198 1209 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 COL10A1Q03692 680 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 FSTL1Q12841 308 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 KRTAP15-1Q3LI76 137 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 SPDYE7PQ495Y7 208 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 DACT2Q5SW24 774 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 ZNF529Q6P280 563 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 Q6YL49 198 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 MIGA2Q7L4E1 593 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 MAPKAPK5Q8IW41 473 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 CCHCR1Q8TD31 782 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 PHACTR3Q96KR7 559 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 ADAM2Q99965 735 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 LDAHQ9H6V9 325 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 ACTL7AQ9Y615 435 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 SMARCA2P51531 1590 aa7.44□□□□□ -1.22
CCDC39-202ENST00000471307 ATAD2BQ9ULI0 1458 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 PIPSLA2A3N6 862 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 CDKL5O76039 1030 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 AMY1AP04745 511 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 IARSP41252 1262 aaKnown RBP7.43□□□□□ -1.22
CCDC39-202ENST00000471307 GUCY2FP51841 1108 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 RESTQ13127 1097 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 HECTD2Q5U5R9 776 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 LCORLQ8N3X6 602 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 NRG4Q8WWG1 115 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 FUBP1Q96AE4 644 aaKnown RBP7.43□□□□□ -1.22
CCDC39-202ENST00000471307 FAXDC2Q96IV6 333 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 WDR11Q9BZH6 1224 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 SYBUQ9NX95 663 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 ANKFY1Q9P2R3 1169 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 WIZO95785 1651 aa7.43□□□□□ -1.22
CCDC39-202ENST00000471307 MYBBP1AQ9BQG0 1328 aaKnown RBP7.43□□□□□ -1.22
CCDC39-202ENST00000471307 KLHL33A6NCF5 533 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 NDUFS2O75306 463 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 FOSP01100 380 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-202ENST00000471307 DDCP20711 480 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 TSHZ3Q63HK5 1081 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 FAM43AQ8N2R8 423 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 TMEM132CQ8N3T6 1108 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 SUPT20HQ8NEM7 779 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 NLGN4YQ8NFZ3 816 aaPredicted RBP7.42□□□□□ -1.22
CCDC39-202ENST00000471307 JADE3Q92613 823 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 BOD1Q96IK1 185 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 TMEM74BQ9NUR3 256 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 TRHDEQ9UKU6 1024 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 INTUQ9ULD6 942 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 NOX1Q9Y5S8 564 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 MRFAP1Q9Y605 127 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 NCAPD3P42695 1498 aa7.42□□□□□ -1.22
CCDC39-202ENST00000471307 A0A1B0GTW7 788 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 SHTN1A0MZ66 631 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 OVOL3O00110 214 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 SGTAO43765 313 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 HKR1P10072 659 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 CTXN1P60606 82 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 AMPD3Q01432 767 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 OCA2Q04671 838 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 ITKQ08881 620 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 MTMR1Q13613 665 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 RHOT1Q8IXI2 618 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 LINC00476Q8WZB0 136 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 HDAC10Q969S8 669 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 ZG16BQ96DA0 208 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 FBXO34Q9NWN3 711 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 RNF181Q9P0P0 153 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 KCNE5Q9UJ90 142 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 CC2D2AQ9P2K1 1620 aa7.41□□□□□ -1.22
CCDC39-202ENST00000471307 SPDEFO95238 335 aa7.4□□□□□ -1.22
CCDC39-202ENST00000471307 LMNAP02545 664 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms