RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 GPR45Q9Y5Y3 372 aa2□□□□□ -2.09
UBXN4-207ENST00000471246 FAM171A2A8MVW0 826 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 K7ESF4 209 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 B3GALT2O43825 422 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 GPR32O75388 356 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 SPDEFO95238 335 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 GCP02774 474 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 IL2RBP14784 551 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 ATP5JP18859 108 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 FPR1P21462 350 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 AGXTP21549 392 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 PCSK1P29120 753 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 BMPR1AP36894 532 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 ZEB1P37275 1124 aaPredicted RBP1.99□□□□□ -2.09
UBXN4-207ENST00000471246 IARSP41252 1262 aaKnown RBP1.99□□□□□ -2.09
UBXN4-207ENST00000471246 SLC6A9P48067 706 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 GUCY1B3Q02153 619 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 KLF1Q13351 362 aaPredicted RBP1.99□□□□□ -2.09
UBXN4-207ENST00000471246 TP53BP2Q13625 1128 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 NOMO1Q15155 1222 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 RRP12Q5JTH9 1297 aaKnown RBP1.99□□□□□ -2.09
UBXN4-207ENST00000471246 AGAP9Q5VTM2 703 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 FAM180AQ6UWF9 173 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 ARHGEF19Q8IW93 802 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 RHOT2Q8IXI1 618 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 OR56A1Q8NGH5 318 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 OR2I1PQ8NGU4 316 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 CASKIN2Q8WXE0 1202 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 ASB10Q8WXI3 467 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 FUBP3Q96I24 572 aaKnown RBP eCLIP1.99□□□□□ -2.09
UBXN4-207ENST00000471246 ZSWIM1Q9BR11 485 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 MRI1Q9BV20 369 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 WDR11Q9BZH6 1224 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 SERHL2Q9H4I8 314 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 CYP4F11Q9HBI6 524 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 ZNF277Q9NRM2 450 aaPredicted RBP1.99□□□□□ -2.09
UBXN4-207ENST00000471246 TMEM140Q9NV12 185 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 KLHL11Q9NVR0 708 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 MOCS1Q9NZB8 636 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 DKK2Q9UBU2 259 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 MCM8Q9UJA3 840 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 AJAP1Q9UKB5 411 aaPredicted RBP1.99□□□□□ -2.09
UBXN4-207ENST00000471246 RUVBL1Q9Y265 456 aaKnown RBP1.99□□□□□ -2.09
UBXN4-207ENST00000471246 SIK3Q9Y2K2 1263 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 MAP3K2Q9Y2U5 619 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 PCDHGA2Q9Y5H1 932 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 ACTL7AQ9Y615 435 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 FPGT-TNNI3KV9GXZ4 949 aa1.99□□□□□ -2.09
UBXN4-207ENST00000471246 PNPLA7Q6ZV29 1317 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 TRIM75PA6NK02 468 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 DRGXA6NNA5 263 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 TEX33O43247 280 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 IGSF3O75054 1194 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 CDKL5O76039 1030 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 RHOBTB3O94955 611 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 MT-CO1P00395 513 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 LMNAP02545 664 aaKnown RBP1.98□□□□□ -2.09
UBXN4-207ENST00000471246 CFIP05156 583 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 HLA-DOAP06340 250 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 ELANEP08246 267 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 TYRP1P17643 537 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 FGFR4P22455 802 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 SLC6A2P23975 617 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 MXRA7P84157 204 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 OCA2Q04671 838 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 MTM1Q13496 603 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 OTUD7BQ6GQQ9 843 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 ZNF529Q6P280 563 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 SEM1Q6ZVN7 128 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 MED25Q71SY5 747 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 UBE3BQ7Z3V4 1068 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 NECAB2Q7Z6G3 386 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 DDX42Q86XP3 938 aaKnown RBP eCLIP1.98□□□□□ -2.09
UBXN4-207ENST00000471246 MAPKAPK5Q8IW41 473 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 AMOTL1Q8IY63 956 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 CMTR2Q8IYT2 770 aaKnown RBP1.98□□□□□ -2.09
UBXN4-207ENST00000471246 LCORLQ8N3X6 602 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 ZGPATQ8N5A5 531 aaKnown RBP1.98□□□□□ -2.09
UBXN4-207ENST00000471246 CNTD1Q8N815 330 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 SUPT20HQ8NEM7 779 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.98□□□□□ -2.09
UBXN4-207ENST00000471246 CCHCR1Q8TD31 782 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 RAB24Q969Q5 203 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 SLC2A13Q96QE2 648 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 MYOCQ99972 504 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 TMX1Q9H3N1 280 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 TOR3AQ9H497 397 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 RNPEPQ9H4A4 650 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 MANSC1Q9H8J5 431 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 FBXO34Q9NWN3 711 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 SYBUQ9NX95 663 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 SLC23A1Q9UHI7 598 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 USP25Q9UHP3 1055 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 PACSIN3Q9UKS6 424 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 DNM3Q9UQ16 869 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 ATP11BQ9Y2G3 1177 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 PHLDB1Q86UU1 1377 aa1.98□□□□□ -2.09
UBXN4-207ENST00000471246 COL4A3Q01955 1670 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 A0A1B0GTW7 788 aa1.97□□□□□ -2.09
UBXN4-207ENST00000471246 PIPSLA2A3N6 862 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms