RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 ZNF211Q13398 564 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 TIGD7Q6NT04 549 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 MICALL2Q8IY33 904 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 TNIP2Q8NFZ5 429 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 LRRC39Q96DD0 335 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 DDX50Q9BQ39 737 aaKnown RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 C11orf70Q9BRQ4 267 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 NUP85Q9BW27 656 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 MUC3BQ9H195 1237 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 KLHL1Q9NR64 748 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 ARHGEF38Q9NXL2 777 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 BFARQ9NZS9 450 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 UVRAGQ9P2Y5 699 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 RWDD2AQ9UIY3 292 aa7.24□□□□□ -1.25
BRCA1-210ENST00000471181 DIS3Q9Y2L1 958 aaKnown RBP7.24□□□□□ -1.25
BRCA1-210ENST00000471181 GOLGA8TH3BQL2 631 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 APOL1O14791 398 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PPP6R2O75170 966 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 A1BGP04217 495 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ATP1A1P05023 1023 aaKnown RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PLA2G4BP0C869 781 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CLUP10909 449 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 GNAT1P11488 350 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 GGCXP38435 758 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 BCAP31P51572 246 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CLCN6P51797 869 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ARF3P61204 181 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ARF1P84077 181 aaKnown RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CNTN1Q12860 1018 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 MMRN1Q13201 1228 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 STX3Q13277 289 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 NCAPHQ15003 741 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 TRADDQ15628 312 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF57Q68EA5 555 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SDE2Q6IQ49 451 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PGBD2Q6P3X8 592 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ATP11CQ8NB49 1132 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 TBCKQ8TEA7 893 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ADAM33Q9BZ11 813 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 WWP1Q9H0M0 922 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 MAN1B1Q9UKM7 699 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 STAP1Q9ULZ2 295 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PRR23AA6NEV1 266 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 STXBP3O00186 592 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SGSM2O43147 1006 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 MAP3K13O43283 966 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 KIF1CO43896 1103 aaKnown RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PFKFB2O60825 505 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 NDUFS3O75489 264 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 GSTM1P09488 218 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 HSMCR30P0CW71 290 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 POU1F1P28069 291 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 RRM2P31350 389 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PRIM2P49643 509 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 KCNK10P57789 538 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 RBM6P78332 1123 aaKnown RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SEMA3FQ13275 785 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 WLSQ5T9L3 541 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SYDE2Q5VT97 1194 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 G2E3Q7L622 706 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PID1Q7Z2X4 250 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 RHOT2Q8IXI1 618 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 IQCF2Q8IXL9 164 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 RNFT2Q96EX2 444 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PIGSQ96S52 555 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 FAM129BQ96TA1 746 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PRMT1Q99873 361 aaKnown RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 INTS13Q9NVM9 706 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ERAP1Q9NZ08 941 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 GMNCA6NCL1 334 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SNTNA6NMZ2 147 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 AP3B1O00203 1094 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SMNDC1O75940 238 aaKnown RBP eCLIP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CALB1P05937 261 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 EIF2AK2P19525 551 aaKnown RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 HOXA13P31271 388 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 TALDO1P37837 337 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 BAG6P46379 1132 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 DDX39BQ13838 428 aaKnown RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 IDI1Q13907 227 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PCSK7Q16549 785 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 TTC33Q6PID6 262 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 EPHX4Q8IUS5 362 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SLC25A41Q8N5S1 370 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 DDHD1Q8NEL9 900 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 COA7Q96BR5 231 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 WNK4Q96J92 1243 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 ZNF668Q96K58 619 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PNKPQ96T60 521 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SLC9A7Q96T83 725 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 DNAJC12Q9UKB3 198 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 LAD1O00515 517 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CYP7B1O75881 506 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 PDE5AO76074 875 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 CDC25BP30305 580 aa7.23□□□□□ -1.25
BRCA1-210ENST00000471181 KPNA1P52294 538 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 SESN2P58004 480 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-210ENST00000471181 EIF2B5Q13144 721 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms