RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 SPATA31D4Q6ZUB0 917 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 TAS1R1Q7RTX1 841 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 DDX1Q92499 740 aaKnown RBP9.83□□□□□ -0.84
XRN1-208ENST00000470537 TCEANC2Q96MN5 208 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 CNTNAP3BQ96NU0 1288 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 GAD1Q99259 594 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 NAP1L4Q99733 375 aaKnown RBP9.83□□□□□ -0.84
XRN1-208ENST00000470537 DDX23Q9BUQ8 820 aaKnown RBP9.83□□□□□ -0.84
XRN1-208ENST00000470537 CNTNAP3Q9BZ76 1288 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 FOXQ1Q9C009 403 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 CSRNP2Q9H175 543 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 DHX33Q9H6R0 707 aaKnown RBP9.83□□□□□ -0.84
XRN1-208ENST00000470537 MARCH5Q9NX47 278 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 KCNH3Q9ULD8 1083 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 IPPQ9Y573 584 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 TPRP12270 2363 aaKnown RBP9.83□□□□□ -0.84
XRN1-208ENST00000470537 ZMYM2Q9UBW7 1377 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 CACNA1IQ9P0X4 2223 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 DNAH14Q0VDD8 3507 aa9.83□□□□□ -0.84
XRN1-208ENST00000470537 MTCL1Q9Y4B5 1905 aaKnown RBP9.82□□□□□ -0.84
XRN1-208ENST00000470537 FANCMQ8IYD8 2048 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 STBD1O95210 358 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 EFEMP2O95967 443 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 IFNAR1P17181 557 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 MLH1P40692 756 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 RPS9P46781 194 aaKnown RBP9.82□□□□□ -0.84
XRN1-208ENST00000470537 AFF1P51825 1210 aaKnown RBP9.82□□□□□ -0.84
XRN1-208ENST00000470537 GRIK3Q13003 919 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 PPP2R5CQ13362 524 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 CPLX2Q6PUV4 134 aaKnown RBP9.82□□□□□ -0.84
XRN1-208ENST00000470537 B3GNT9Q6UX72 402 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 GRASPQ7Z6J2 395 aaPredicted RBP9.82□□□□□ -0.84
XRN1-208ENST00000470537 FERMT3Q86UX7 667 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 C4orf19Q8IY42 314 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 FBXL16Q8N461 479 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 ZBTB44Q8NCP5 570 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 FGF13Q92913 245 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 MBOAT7Q96N66 472 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 SH2D3AQ9BRG2 576 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 IER2Q9BTL4 223 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 TTPALQ9BTX7 342 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 PHF20Q9BVI0 1012 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 KLF16Q9BXK1 252 aaPredicted RBP9.82□□□□□ -0.84
XRN1-208ENST00000470537 SLC26A6Q9BXS9 759 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 EPC1Q9H2F5 836 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 DDX25Q9UHL0 483 aaKnown RBP9.82□□□□□ -0.84
XRN1-208ENST00000470537 USP18Q9UMW8 372 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 PCDHA4Q9UN74 947 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 POLIQ9UNA4 740 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 EPG5Q9HCE0 2579 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 NCOR2Q9Y618 2525 aa9.82□□□□□ -0.84
XRN1-208ENST00000470537 TMEM150BA6NC51 233 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 INO80B-WBP1J3KQ70 363 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 MAN2B1O00754 1011 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 B4GALT3O60512 393 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 LRP3O75074 770 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 BAG4O95429 457 aaKnown RBP9.81□□□□□ -0.84
XRN1-208ENST00000470537 POU2F2P09086 479 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 MYBP10242 640 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 GLULP15104 373 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 GCFC2P16383 781 aaKnown RBP9.81□□□□□ -0.84
XRN1-208ENST00000470537 PSMA5P28066 241 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 YWHABP31946 246 aaKnown RBP9.81□□□□□ -0.84
XRN1-208ENST00000470537 SCNN1GP51170 649 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 PTENP60484 403 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 ADCY1Q08828 1119 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 SSRP1Q08945 709 aaKnown RBP9.81□□□□□ -0.84
XRN1-208ENST00000470537 AGERQ15109 404 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 UBXN11Q5T124 520 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 PPP4R3AQ6IN85 833 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 SLC27A1Q6PCB7 646 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 BLOC1S2Q6QNY1 142 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 PARM1Q6UWI2 310 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 Q6ZUG5 572 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 KRT25Q7Z3Z0 450 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 MAML2Q8IZL2 1156 aaPredicted RBP9.81□□□□□ -0.84
XRN1-208ENST00000470537 CELF5Q8N6W0 485 aaKnown RBP9.81□□□□□ -0.84
XRN1-208ENST00000470537 SMG8Q8ND04 991 aaKnown RBP9.81□□□□□ -0.84
XRN1-208ENST00000470537 FGF14Q92915 247 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 FOXJ1Q92949 421 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 BRF1Q92994 677 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 TMEM143Q96AN5 459 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 CLDN23Q96B33 292 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 CHAMP1Q96JM3 812 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 CCDC43Q96MW1 224 aaKnown RBP9.81□□□□□ -0.84
XRN1-208ENST00000470537 GPR62Q9BZJ7 368 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 ZSWIM4Q9H7M6 989 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 LTB4R2Q9NPC1 389 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 GDE1Q9NZC3 331 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 VPS54Q9P1Q0 977 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 MAP10Q9P2G4 905 aa9.81□□□□□ -0.84
XRN1-208ENST00000470537 SMG5Q9UPR3 1016 aaKnown RBP9.81□□□□□ -0.84
XRN1-208ENST00000470537 DOCK8Q8NF50 2099 aa9.8□□□□□ -0.84
XRN1-208ENST00000470537 CFAP99D6REC4 459 aa9.8□□□□□ -0.84
XRN1-208ENST00000470537 CPLX1O14810 134 aa9.8□□□□□ -0.84
XRN1-208ENST00000470537 TBX3O15119 743 aa9.8□□□□□ -0.84
XRN1-208ENST00000470537 TRAPPC3O43617 180 aa9.8□□□□□ -0.84
XRN1-208ENST00000470537 MAN1A2O60476 641 aa9.8□□□□□ -0.84
XRN1-208ENST00000470537 LILRB5O75023 590 aa9.8□□□□□ -0.84
XRN1-208ENST00000470537 ZIC2O95409 532 aaPredicted RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms