RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 DCLRE1AQ6PJP8 1040 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 CD300LGQ6UXG3 332 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 PPFIBP1Q86W92 1011 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 SPATA32Q96LK8 384 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 C7orf25Q9BPX7 421 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 EMILIN2Q9BXX0 1053 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 TRIM9Q9C026 710 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 S1PR5Q9H228 398 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 PLEKHA5Q9HAU0 1116 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 MAGEF1Q9HAY2 307 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 RXFP1Q9HBX9 757 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 SLC38A7Q9NVC3 462 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 PRKAG3Q9UGI9 489 aa15.44■□□□□ 0.06
TOP3B-215ENST00000470338 SF3B1O75533 1304 aaKnown RBP eCLIP15.43■□□□□ 0.06
TOP3B-215ENST00000470338 TTC26A0AVF1 554 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 TNFRSF10AO00220 468 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 ADRB2P07550 413 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 CMA1P23946 247 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 TNFSF9P41273 254 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 CLCNKBP51801 687 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 L1TD1Q5T7N2 865 aaKnown RBP15.43■□□□□ 0.06
TOP3B-215ENST00000470338 SLFN12LQ6IEE8 588 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 KIAA1841Q6NSI8 718 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 CCDC65Q8IXS2 484 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 TMEM87AQ8NBN3 555 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 DDX27Q96GQ7 796 aaKnown RBP15.43■□□□□ 0.06
TOP3B-215ENST00000470338 PYM1Q9BRP8 204 aaKnown RBP15.43■□□□□ 0.06
TOP3B-215ENST00000470338 MSTO1Q9BUK6 570 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 GOLGA2P5Q9HBQ8 144 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 TBC1D7Q9P0N9 293 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 KCNH3Q9ULD8 1083 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 PCDHB13Q9Y5F0 798 aa15.43■□□□□ 0.06
TOP3B-215ENST00000470338 C2CD2LO14523 706 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 TEX28O15482 410 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 CXCL8P10145 99 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 EPCAMP16422 314 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 IGFBP6P24592 240 aaPredicted RBP15.42■□□□□ 0.06
TOP3B-215ENST00000470338 KLRC2P26717 231 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 RPL9P32969 192 aaKnown RBP15.42■□□□□ 0.06
TOP3B-215ENST00000470338 CLCN4P51793 760 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 CASP5P51878 434 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 KCNA1Q09470 495 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 ELAVL2Q12926 359 aaKnown RBP15.42■□□□□ 0.06
TOP3B-215ENST00000470338 ALCAMQ13740 583 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 ZBTB6Q15916 424 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 ENOX2Q16206 610 aaKnown RBP15.42■□□□□ 0.06
TOP3B-215ENST00000470338 ZBTB41Q5SVQ8 909 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 HASPINQ8TF76 798 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 SUSD6Q92537 303 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 B3GALT6Q96L58 329 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 ACCSQ96QU6 501 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 TSPAN18Q96SJ8 248 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 SCAND2PQ9GZW5 306 aaPredicted RBP15.42■□□□□ 0.06
TOP3B-215ENST00000470338 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.42■□□□□ 0.06
TOP3B-215ENST00000470338 FNIP2Q9P278 1114 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 CPSF3Q9UKF6 684 aaKnown RBP15.42■□□□□ 0.06
TOP3B-215ENST00000470338 EXOC7Q9UPT5 735 aa15.42■□□□□ 0.06
TOP3B-215ENST00000470338 USP15Q9Y4E8 981 aaPredicted RBP15.42■□□□□ 0.06
TOP3B-215ENST00000470338 C19orf67A6NJJ6 358 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 LACTBL1A8MY62 500 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 TISP43B9A030 160 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 B3GAT3O94766 335 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 GCNT3O95395 438 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 C1RP00736 705 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 MYBP10242 640 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 ADSSP30520 456 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 POU5F1Q01860 360 aaKnown RBP15.41■□□□□ 0.06
TOP3B-215ENST00000470338 ZP2Q05996 745 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 POSTNQ15063 836 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 TPRNQ4KMQ1 711 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 RTP2Q5QGT7 225 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 FAM171A1Q5VUB5 890 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 ADHFE1Q8IWW8 467 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 C3orf58Q8NDZ4 430 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 RIN2Q8WYP3 895 aaPredicted RBP15.41■□□□□ 0.06
TOP3B-215ENST00000470338 C18orf25Q96B23 403 aaPredicted RBP15.41■□□□□ 0.06
TOP3B-215ENST00000470338 TTPALQ9BTX7 342 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 FGFBP2Q9BYJ0 223 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 IKZF4Q9H2S9 585 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 RPF1Q9H9Y2 349 aaKnown RBP15.41■□□□□ 0.06
TOP3B-215ENST00000470338 CD320Q9NPF0 282 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 DZANK1Q9NVP4 752 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 HPSEQ9Y251 543 aa15.41■□□□□ 0.06
TOP3B-215ENST00000470338 C2orf16Q68DN1 1984 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 FAM237AA0A1B0GTK4 181 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 PODXLO00592 558 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 ADH1AP07327 375 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 SLFN14P0C7P3 912 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 FGFR3P22607 806 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 ASIC1P78348 528 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 NUCB2P80303 420 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 CREMQ03060 361 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 ITIH3Q06033 890 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 PPP2R3AQ06190 1150 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 EHHADHQ08426 723 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.4■□□□□ 0.06
TOP3B-215ENST00000470338 CD302Q8IX05 232 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 GJD3Q8N144 294 aa15.4■□□□□ 0.06
TOP3B-215ENST00000470338 LNX1Q8TBB1 728 aaPredicted RBP15.4■□□□□ 0.06
TOP3B-215ENST00000470338 PIK3R5Q8WYR1 880 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms