RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 NPTX2P47972 431 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 LRMPQ12912 555 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 KCNB1Q14721 858 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 HYIQ5T013 277 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 ANKRD54Q6NXT1 300 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 SYCE2Q6PIF2 218 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 C1orf186Q6ZWK4 172 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 CABP7Q86V35 215 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 CDK5RAP3Q96JB5 506 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 SNTG2Q9NY99 539 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 NFE2L3Q9Y4A8 694 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 FAM86C2PA6NEL3 165 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 C19orf67A6NJJ6 358 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 SRGAP2BP0DMP2 458 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 ATP1A3P13637 1013 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 EFNA5P52803 228 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 BMS1Q14692 1282 aaKnown RBP19.22■□□□□ 0.67
MRPL28-208ENST00000469744 PTPN14Q15678 1187 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 TMEM184AQ6ZMB5 413 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 TAS1R1Q7RTX1 841 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 FILIP1Q7Z7B0 1213 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 RPS6KC1Q96S38 1066 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 ADPGKQ9BRR6 497 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 GDAQ9Y2T3 454 aa19.22■□□□□ 0.67
MRPL28-208ENST00000469744 TRIP11Q15643 1979 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 NPHP3-ACAD11A0A0J9YXS1 232 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 PPP1R3GB7ZBB8 358 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 K7ERI5 159 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 C2CD2LO14523 706 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 NRDCO43847 1150 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 RECQL4O94761 1208 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 CACNB1Q02641 598 aaPredicted RBP19.21■□□□□ 0.67
MRPL28-208ENST00000469744 DMP1Q13316 513 aaPredicted RBP19.21■□□□□ 0.67
MRPL28-208ENST00000469744 TMEM119Q4V9L6 283 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 ZNF658Q5TYW1 1059 aaPredicted RBP19.21■□□□□ 0.67
MRPL28-208ENST00000469744 ATF7IP2Q5U623 682 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 TMC6Q7Z403 805 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 VSTM4Q8IW00 320 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 LRRC15Q8TF66 581 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 DRC1Q96MC2 740 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 S1PR5Q9H228 398 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 KBTBD4Q9NVX7 518 aa19.21■□□□□ 0.67
MRPL28-208ENST00000469744 SLC16A4O15374 487 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 SLC26A4O43511 780 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 RPN1P04843 607 aaKnown RBP19.2■□□□□ 0.66
MRPL28-208ENST00000469744 PLA2G4BP0C869 781 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 EPCAMP16422 314 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 SLC12A3P55017 1021 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 CCZ1BP86790 482 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 CCZ1P86791 482 aaPredicted RBP19.2■□□□□ 0.66
MRPL28-208ENST00000469744 GRIK3Q13003 919 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 KARSQ15046 597 aaKnown RBP19.2■□□□□ 0.66
MRPL28-208ENST00000469744 TAS1R3Q7RTX0 852 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 CASP10Q92851 521 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 POP1Q99575 1024 aaKnown RBP19.2■□□□□ 0.66
MRPL28-208ENST00000469744 PAAF1Q9BRP4 392 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 NT5C3AQ9H0P0 336 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 KMT5AQ9NQR1 393 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 IRAK3Q9Y616 596 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 PHLPP2Q6ZVD8 1323 aa19.2■□□□□ 0.66
MRPL28-208ENST00000469744 PI4K2BG5E9Z4 385 aa19.19■□□□□ 0.66
MRPL28-208ENST00000469744 PTGESO14684 152 aa19.19■□□□□ 0.66
MRPL28-208ENST00000469744 C12orf76Q8N812 135 aaPredicted RBP19.19■□□□□ 0.66
MRPL28-208ENST00000469744 SYT2Q8N9I0 419 aaPredicted RBP19.19■□□□□ 0.66
MRPL28-208ENST00000469744 SUSD6Q92537 303 aa19.19■□□□□ 0.66
MRPL28-208ENST00000469744 B3GALT6Q96L58 329 aa19.19■□□□□ 0.66
MRPL28-208ENST00000469744 MED15Q96RN5 788 aa19.19■□□□□ 0.66
MRPL28-208ENST00000469744 C1QTNF1Q9BXJ1 281 aa19.19■□□□□ 0.66
MRPL28-208ENST00000469744 ARHGAP28Q9P2N2 729 aa19.19■□□□□ 0.66
MRPL28-208ENST00000469744 RAPGEFL1Q9UHV5 662 aa19.19■□□□□ 0.66
MRPL28-208ENST00000469744 CASTOR2A6NHX0 329 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 SOD2P04179 222 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 CNPP09543 421 aaKnown RBP19.18■□□□□ 0.66
MRPL28-208ENST00000469744 WEE2P0C1S8 567 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 SKILP12757 684 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 CDK11BP21127 795 aaKnown RBP19.18■□□□□ 0.66
MRPL28-208ENST00000469744 SP100P23497 879 aaPredicted RBP19.18■□□□□ 0.66
MRPL28-208ENST00000469744 GUCY2CP25092 1073 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 DCAF4L1Q3SXM0 396 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 CEP120Q8N960 986 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 CCDC112Q8NEF3 446 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 FEZF2Q8TBJ5 459 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 HASPINQ8TF76 798 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 RPGRIP1Q96KN7 1286 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 HERC2P3Q9BVR0 1158 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 C11orf16Q9NQ32 467 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 MRPL17Q9NRX2 175 aaKnown RBP19.18■□□□□ 0.66
MRPL28-208ENST00000469744 RWDD2AQ9UIY3 292 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 ZMYM2Q9UBW7 1377 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 PLXNA3P51805 1871 aa19.18■□□□□ 0.66
MRPL28-208ENST00000469744 URODP06132 367 aa19.17■□□□□ 0.66
MRPL28-208ENST00000469744 CD44P16070 742 aaKnown RBP19.17■□□□□ 0.66
MRPL28-208ENST00000469744 PPP1R2P41236 205 aa19.17■□□□□ 0.66
MRPL28-208ENST00000469744 AMPD3Q01432 767 aa19.17■□□□□ 0.66
MRPL28-208ENST00000469744 GIT2Q14161 759 aa19.17■□□□□ 0.66
MRPL28-208ENST00000469744 CBX2Q14781 532 aaPredicted RBP19.17■□□□□ 0.66
MRPL28-208ENST00000469744 ARSHQ5FYA8 562 aa19.17■□□□□ 0.66
MRPL28-208ENST00000469744 DNTTIP2Q5QJE6 756 aaKnown RBP19.17■□□□□ 0.66
MRPL28-208ENST00000469744 RARS2Q5T160 578 aaKnown RBP19.17■□□□□ 0.66
MRPL28-208ENST00000469744 CDKAL1Q5VV42 579 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms