RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 CSADQ9Y600 493 aa10.1□□□□□ -0.79
TOP3A-203ENST00000469739 DCDC2CA8MYV0 355 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 STBD1O95210 358 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 SUPT20HL2P0C7V6 817 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 RRM1P23921 792 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 ELF1P32519 619 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 HSD17B3P37058 310 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 KIF22Q14807 665 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 Q3C1V9 767 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 SUPT20HL1Q3ZLR7 823 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 SULF1Q8IWU6 871 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 FBXO16Q8IX29 292 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-203ENST00000469739 KIFAP3Q92845 792 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 SYT11Q9BT88 431 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 VIPAS39Q9H9C1 493 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 C1orf112Q9NSG2 853 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 RBAKQ9NYW8 714 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-203ENST00000469739 RNF181Q9P0P0 153 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 NOCTQ9UK39 431 aaKnown RBP10.09□□□□□ -0.79
TOP3A-203ENST00000469739 AFG3L2Q9Y4W6 797 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 MYH9P35579 1960 aaKnown RBP10.09□□□□□ -0.79
TOP3A-203ENST00000469739 UBE4BO95155 1302 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 LAMA3Q16787 3333 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 STK25O00506 426 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 ARIH2O95376 493 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 HLA-DRAP01903 254 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 MUTP22033 750 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 RDXP35241 583 aaKnown RBP10.09□□□□□ -0.79
TOP3A-203ENST00000469739 TCF7P36402 384 aaPredicted RBP10.09□□□□□ -0.79
TOP3A-203ENST00000469739 PSMC4P43686 418 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 AARSP49588 968 aaKnown RBP eCLIP10.09□□□□□ -0.79
TOP3A-203ENST00000469739 SEC24CP53992 1094 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 DR1Q01658 176 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 APOBEC3FQ8IUX4 373 aaKnown RBP10.09□□□□□ -0.79
TOP3A-203ENST00000469739 CCDC50Q8IVM0 306 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 CCDC105Q8IYK2 499 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 TXNRD2Q9NNW7 524 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 RNF14Q9UBS8 474 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 NENFQ9UMX5 172 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 PCDHB4Q9Y5E5 795 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 SNCAIPQ9Y6H5 919 aa10.09□□□□□ -0.79
TOP3A-203ENST00000469739 H0YHG0 523 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 MTM1Q13496 603 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 TDRD10Q5VZ19 366 aaKnown RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 ZNF572Q7Z3I7 529 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 SLFN11Q7Z7L1 901 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 FAM71AQ8IYT1 594 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 ACTRT1Q8TDG2 376 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 PRPF31Q8WWY3 499 aaKnown RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 PIK3R5Q8WYR1 880 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 PWWP2AQ96N64 755 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 CCDC113Q9H0I3 377 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 TMEM8AQ9HCN3 771 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 PDGFCQ9NRA1 345 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 UTP11Q9Y3A2 253 aaKnown RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 CAPN7Q9Y6W3 813 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 COL11A1P12107 1806 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 SOWAHBA6NEL2 793 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 PI4K2BG5E9Z4 385 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 NOP56O00567 594 aaKnown RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 LYPLA2O95372 231 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 CST3P01034 146 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 OATP04181 439 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 WEE2P0C1S8 567 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 CYP2C8P10632 490 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 TMOD1P28289 359 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 ECHS1P30084 290 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 STAT5BP51692 787 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 ITIH3Q06033 890 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 IFFO1Q0D2I5 559 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 UAP1Q16222 522 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 NBPF20Q3BBV1 942 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 XKR3Q5GH77 459 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 RHPN2Q8IUC4 686 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 RNF149Q8NC42 400 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 BCAS4Q8TDM0 211 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 IWS1Q96ST2 819 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 CAPS2Q9BXY5 557 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 PPANQ9NQ55 473 aaKnown RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 LOXHD1Q8IVV2 1947 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 FOXO6A8MYZ6 492 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 SPATA31C2B4DYI2 1134 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 INO80B-WBP1J3KQ70 363 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 PIK3R2O00459 728 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 OPA1O60313 960 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 SHOX2O60902 331 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 RTN2O75298 545 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 KRT19P08727 400 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 ALDH5A1P51649 535 aaPredicted RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 TFAMQ00059 246 aaKnown RBP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 ADCY1Q08828 1119 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 ATP13A4Q4VNC1 1196 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 WDR44Q5JSH3 913 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 KAZNQ674X7 775 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 TTC27Q6P3X3 843 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 MCPH1Q8NEM0 835 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.08□□□□□ -0.8
TOP3A-203ENST00000469739 CCDC26Q8TAB7 109 aa10.08□□□□□ -0.8
TOP3A-203ENST00000469739 FBXO25Q8TCJ0 367 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms