RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 TREML1Q86YW5 311 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 CCDC42Q96M95 316 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 LRRC1Q9BTT6 524 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 MRPL46Q9H2W6 279 aaKnown RBP10.56□□□□□ -0.72
NUP50-214ENST00000469163 MTRF1O75570 445 aaKnown RBP10.56□□□□□ -0.72
NUP50-214ENST00000469163 FAM13AO94988 1023 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 CCT8P50990 548 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 CYP2J2P51589 502 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 TSPY1Q01534 308 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 IL17AQ16552 155 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 MTERF2Q49AM1 385 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 ZC2HC1CQ53FD0 456 aaPredicted RBP10.56□□□□□ -0.72
NUP50-214ENST00000469163 ANKRD13BQ86YJ7 626 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 GLIS3Q8NEA6 775 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 VPS37AQ8NEZ2 397 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 NELFBQ8WX92 580 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 IFT43Q96FT9 208 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 ELAC2Q9BQ52 826 aaKnown RBP10.56□□□□□ -0.72
NUP50-214ENST00000469163 LBHD1Q9BQE6 289 aaPredicted RBP10.56□□□□□ -0.72
NUP50-214ENST00000469163 KIFC3Q9BVG8 833 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 ZMYND12Q9H0C1 365 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 PDP2Q9P2J9 529 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 HSFX1Q9UBD0 423 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 DOLKQ9UPQ8 538 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 DNM3Q9UQ16 869 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 ANKRD36CQ5JPF3 1778 aa10.56□□□□□ -0.72
NUP50-214ENST00000469163 DDX60Q8IY21 1712 aaKnown RBP10.55□□□□□ -0.72
NUP50-214ENST00000469163 GLTPD2A6NH11 291 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 A6NJR5 290 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 USP2O75604 605 aaPredicted RBP10.55□□□□□ -0.72
NUP50-214ENST00000469163 MYZAPP0CAP1 466 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 ACADSP16219 412 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 TKTP29401 623 aaKnown RBP10.55□□□□□ -0.72
NUP50-214ENST00000469163 COG7P83436 770 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 EIF2B5Q13144 721 aaKnown RBP10.55□□□□□ -0.72
NUP50-214ENST00000469163 FAM47CQ5HY64 1035 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 PRAMEF19Q5SWL8 479 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 CCDC122Q5T0U0 273 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 RIBC1Q8N443 379 aaPredicted RBP10.55□□□□□ -0.72
NUP50-214ENST00000469163 TTC39CQ8N584 583 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 KLRG1Q96E93 195 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 TRPC7Q9HCX4 862 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 MAN1B1Q9UKM7 699 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 ARHGEF35A5YM69 484 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 ASMTLO95671 621 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 FOSL1P15407 271 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 HOXD10P28358 340 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 CCNG1P51959 295 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 AMPD2Q01433 879 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 TATDN1Q6P1N9 297 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 ANO5Q75V66 913 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 DPH6Q7L8W6 267 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 FAM83AQ86UY5 434 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 NUDCD1Q96RS6 583 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 CCSER1Q9C0I3 900 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 GLT8D2Q9H1C3 349 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 RNF19AQ9NV58 838 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 DDX18Q9NVP1 670 aaKnown RBP10.55□□□□□ -0.72
NUP50-214ENST00000469163 TRIM10Q9UDY6 481 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 UBR3Q6ZT12 1888 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 BCORQ6W2J9 1755 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 ADCY3O60266 1144 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 CALB2P22676 271 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 NCALDP61601 193 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 RALGDSQ12967 914 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 MSLNQ13421 630 aaPredicted RBP10.55□□□□□ -0.72
NUP50-214ENST00000469163 CYLC2Q14093 348 aaPredicted RBP10.55□□□□□ -0.72
NUP50-214ENST00000469163 FAM209AQ5JX71 171 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 KCNK18Q7Z418 384 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 ANKRD13AQ8IZ07 590 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 FERMT2Q96AC1 680 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 FAM84AQ96KN4 292 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 SMC6Q96SB8 1091 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 SEPT9Q9UHD8 586 aaPredicted RBP10.55□□□□□ -0.72
NUP50-214ENST00000469163 FEM1BQ9UK73 627 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 TRIM17Q9Y577 477 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 FADS3Q9Y5Q0 445 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 C10orf71Q711Q0 1435 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 STK36Q9NRP7 1315 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 TUBGCP6Q96RT7 1819 aa10.55□□□□□ -0.72
NUP50-214ENST00000469163 SNED1Q8TER0 1413 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 RSPH10B2B2RC85 870 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 NVLO15381 856 aaKnown RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 RPN1P04843 607 aaKnown RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 RSPH10BP0C881 870 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 RXRGP48443 463 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 PTDSS1P48651 473 aaKnown RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 TMTC4Q5T4D3 741 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 RESP18Q5W5W9 173 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 SWSAP1Q6NVH7 229 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 TAOK1Q7L7X3 1001 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 TRAPPC11Q7Z392 1133 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 CSGALNACT2Q8N6G5 542 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 SCAIQ8N9R8 606 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 HSPBAP1Q96EW2 488 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 CHMP6Q96FZ7 201 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 XPO6Q96QU8 1125 aaKnown RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 RIOX1Q9H6W3 641 aa10.54□□□□□ -0.72
NUP50-214ENST00000469163 SPDYE16A6NNV3 312 aaPredicted RBP10.54□□□□□ -0.72
NUP50-214ENST00000469163 RNASELQ05823 741 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms