RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 ORC2Q13416 577 aaPredicted RBP13.47□□□□□ -0.25
COL5A1-207ENST00000469093 MLF2Q15773 248 aaPredicted RBP13.47□□□□□ -0.25
COL5A1-207ENST00000469093 PABPC1LQ4VXU2 614 aaKnown RBP13.47□□□□□ -0.25
COL5A1-207ENST00000469093 POTEHQ6S545 545 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 ALKAL1Q6UXT8 129 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 ANKS3Q6ZW76 656 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 NPAS3Q8IXF0 933 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 C4orf32Q8N8J7 132 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 C3orf58Q8NDZ4 430 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 KIFAP3Q92845 792 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 RMDN1Q96DB5 314 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 IFT74Q96LB3 600 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 KXD1Q9BQD3 176 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 FOXP1Q9H334 677 aaPredicted RBP13.47□□□□□ -0.25
COL5A1-207ENST00000469093 GOLGA2P5Q9HBQ8 144 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 TNFSF13BQ9Y275 285 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 DMDP11532 3685 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 NOTCH4Q99466 2003 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 DCHS1Q96JQ0 3298 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 CEP250Q9BV73 2442 aa13.47□□□□□ -0.25
COL5A1-207ENST00000469093 WDR87Q6ZQQ6 2873 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 F5P12259 2224 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 FAM170BA6NMN3 283 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 I3L4J1 428 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 TRAPPC3O43617 180 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 CD72P21854 359 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 CCT6AP40227 531 aaKnown RBP13.46□□□□□ -0.25
COL5A1-207ENST00000469093 BRCC3P46736 316 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 PFKPQ01813 784 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 SOX4Q06945 474 aaPredicted RBP13.46□□□□□ -0.25
COL5A1-207ENST00000469093 XKR4Q5GH76 650 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 TTC38Q5R3I4 469 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 ZC3H14Q6PJT7 736 aaKnown RBP13.46□□□□□ -0.25
COL5A1-207ENST00000469093 KIAA2013Q8IYS2 634 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 CEP120Q8N960 986 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 ZNF461Q8TAF7 563 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 ING5Q8WYH8 240 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 MCRS1Q96EZ8 462 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 DDX27Q96GQ7 796 aaKnown RBP13.46□□□□□ -0.25
COL5A1-207ENST00000469093 C8orf76Q96K31 380 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 UROC1Q96N76 676 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 BCO2Q9BYV7 579 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 OSBPL6Q9BZF3 934 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 PLA2G2FQ9BZM2 168 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 PTPRHQ9HD43 1115 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 MRPS23Q9Y3D9 190 aaKnown RBP13.46□□□□□ -0.25
COL5A1-207ENST00000469093 VWA8A3KMH1 1905 aa13.46□□□□□ -0.25
COL5A1-207ENST00000469093 CACNA1AO00555 2505 aa13.46□□□□□ -0.26
COL5A1-207ENST00000469093 ABLIM3O94929 683 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 RHOP08100 348 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 GRM5P41594 1212 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 FXR2P51116 673 aaKnown RBP eCLIP13.45□□□□□ -0.26
COL5A1-207ENST00000469093 OSTNP61366 133 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 PDIA5Q14554 519 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 UBXN2BQ14CS0 331 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 SLC5A9Q2M3M2 681 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 HAUS3Q68CZ6 603 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 SLC8B1Q6J4K2 584 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 APBB1IPQ7Z5R6 666 aaPredicted RBP13.45□□□□□ -0.26
COL5A1-207ENST00000469093 DCLK2Q8N568 766 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 SUMF1Q8NBK3 374 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 FBXO18Q8NFZ0 1043 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 RUBCNQ92622 972 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 ZMAT2Q96NC0 199 aaKnown RBP13.45□□□□□ -0.26
COL5A1-207ENST00000469093 ACO2Q99798 780 aaKnown RBP13.45□□□□□ -0.26
COL5A1-207ENST00000469093 LTB4R2Q9NPC1 389 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 AVENQ9NQS1 362 aaPredicted RBP13.45□□□□□ -0.26
COL5A1-207ENST00000469093 SPATA6Q9NWH7 488 aaPredicted RBP13.45□□□□□ -0.26
COL5A1-207ENST00000469093 GDE1Q9NZC3 331 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 LRWD1Q9UFC0 647 aa13.45□□□□□ -0.26
COL5A1-207ENST00000469093 ARHGEF37A1IGU5 675 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 CCDC169A6NNP5 214 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 TBC1D4O60343 1298 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 ECI2O75521 394 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 PTPN2P17706 415 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 NPTX2P47972 431 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 TRAPPC10P48553 1259 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 PEX3P56589 373 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 ROR1Q01973 937 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 MRPL58Q14197 206 aaKnown RBP13.44□□□□□ -0.26
COL5A1-207ENST00000469093 NBR1Q14596 966 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 ZNF528Q3MIS6 628 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 VARS2Q5ST30 1063 aaKnown RBP13.44□□□□□ -0.26
COL5A1-207ENST00000469093 TANGO2Q6ICL3 276 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 TAS1R3Q7RTX0 852 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 CLDN23Q96B33 292 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 NELL2Q99435 816 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 LLPHQ9BRT6 129 aaKnown RBP13.44□□□□□ -0.26
COL5A1-207ENST00000469093 CCDC94Q9BW85 323 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-207ENST00000469093 TARS2Q9BW92 718 aaKnown RBP13.44□□□□□ -0.26
COL5A1-207ENST00000469093 CDT1Q9H211 546 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 TMEM134Q9H6X4 195 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 TOPORSQ9NS56 1045 aaPredicted RBP13.44□□□□□ -0.26
COL5A1-207ENST00000469093 DDX19AQ9NUU7 478 aaKnown RBP13.44□□□□□ -0.26
COL5A1-207ENST00000469093 SLC38A7Q9NVC3 462 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 FBXO4Q9UKT5 387 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 LIMCH1Q9UPQ0 1083 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 COL4A3Q01955 1670 aa13.44□□□□□ -0.26
COL5A1-207ENST00000469093 TRIP11Q15643 1979 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms