RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 TRAPPC11Q7Z392 1133 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 NECAB2Q7Z6G3 386 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 RTN4RL1Q86UN2 441 aaPredicted RBP13.87□□□□□ -0.19
RUNX1-213ENST00000469087 CNGA4Q8IV77 575 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 CCDC150Q8NCX0 1101 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 BAP1Q92560 729 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 ELMO3Q96BJ8 720 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 IQCDQ96DY2 449 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 APOL6Q9BWW8 343 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 IFIH1Q9BYX4 1025 aaKnown RBP13.87□□□□□ -0.19
RUNX1-213ENST00000469087 MTMR12Q9C0I1 747 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 HIPK3Q9H422 1215 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 PLEKHA5Q9HAU0 1116 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.87□□□□□ -0.19
RUNX1-213ENST00000469087 FAM105AQ9NUU6 356 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 AJAP1Q9UKB5 411 aaPredicted RBP13.87□□□□□ -0.19
RUNX1-213ENST00000469087 ATP11BQ9Y2G3 1177 aa13.87□□□□□ -0.19
RUNX1-213ENST00000469087 MEIS3P2A8K0S8 358 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 RECQL4O94761 1208 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 EN2P19622 333 aaPredicted RBP13.86□□□□□ -0.19
RUNX1-213ENST00000469087 AP3M2P53677 418 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 ZBED6P86452 979 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 BIRC3Q13489 604 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 CD302Q8IX05 232 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 TMEM130Q8N3G9 435 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 OR8K1Q8NGG5 319 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 ZMAT2Q96NC0 199 aaKnown RBP13.86□□□□□ -0.19
RUNX1-213ENST00000469087 ADAM2Q99965 735 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 PI4K2AQ9BTU6 479 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 TRAIPQ9BWF2 469 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 NAA15Q9BXJ9 866 aaKnown RBP13.86□□□□□ -0.19
RUNX1-213ENST00000469087 EDEM3Q9BZQ6 932 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 ABHD10Q9NUJ1 306 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 RNF19AQ9NV58 838 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 KLK14Q9P0G3 267 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 CEP72Q9P209 647 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 PARP2Q9UGN5 583 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 FHOD1Q9Y613 1164 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
RUNX1-213ENST00000469087 HLA-DRAP01903 254 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 CAPN2P17655 700 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 YARSP54577 528 aaKnown RBP13.86□□□□□ -0.19
RUNX1-213ENST00000469087 CCZ1BP86790 482 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 CCZ1P86791 482 aaPredicted RBP13.86□□□□□ -0.19
RUNX1-213ENST00000469087 IQCEQ6IPM2 695 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 RRAGAQ7L523 313 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 CACNA2D4Q7Z3S7 1137 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 TMEM139Q8IV31 216 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 SCLYQ96I15 445 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 SNX27Q96L92 541 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 PANX2Q96RD6 677 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 DNAJC7Q99615 494 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 APEX2Q9UBZ4 518 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 FBXL5Q9UKA1 691 aa13.86□□□□□ -0.19
RUNX1-213ENST00000469087 A0A0U1RQF3 1178 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 ZNF623O75123 536 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 PHACTR2O75167 634 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 TMEM191BP0C7N4 346 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 CYP2C18P33260 490 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 CCL23P55773 120 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 ZBTB6Q15916 424 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 XKR4Q5GH76 650 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 WDR59Q6PJI9 974 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 MRPL10Q7Z7H8 261 aaKnown RBP13.85□□□□□ -0.19
RUNX1-213ENST00000469087 ARHGEF19Q8IW93 802 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 ZNF397Q8NF99 534 aaPredicted RBP13.85□□□□□ -0.19
RUNX1-213ENST00000469087 DBF4BQ8NFT6 615 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 TATDN2Q93075 761 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 WNT8AQ9H1J5 351 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 DNAJC12Q9UKB3 198 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 TBX21Q9UL17 535 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 C2CD2Q9Y426 696 aa13.85□□□□□ -0.19
RUNX1-213ENST00000469087 SMIM28A0A1B0GU29 152 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 LRRC53A6NM62 1247 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 SKILP12757 684 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 NCOA4Q13772 614 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 TMEM132DQ14C87 1099 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 E4F1Q66K89 784 aaPredicted RBP13.84□□□□□ -0.19
RUNX1-213ENST00000469087 C1orf127Q8N9H9 656 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 CXorf38Q8TB03 319 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 LPPQ93052 612 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 KIF12Q96FN5 646 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 ANKRD36BP1Q96IX9 119 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 BAG1Q99933 345 aaPredicted RBP13.84□□□□□ -0.19
RUNX1-213ENST00000469087 UBE2TQ9NPD8 197 aaPredicted RBP13.84□□□□□ -0.19
RUNX1-213ENST00000469087 RGS18Q9NS28 235 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 TMEM39AQ9NV64 488 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.84□□□□□ -0.19
RUNX1-213ENST00000469087 CNTN3Q9P232 1028 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 SIX4Q9UIU6 781 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 PLAGL2Q9UPG8 496 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 SCN5AQ14524 2016 aa13.84□□□□□ -0.19
RUNX1-213ENST00000469087 TNNC2P02585 160 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 CLTBP09497 229 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 ITGA4P13612 1032 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 ATF7P17544 494 aaPredicted RBP13.83□□□□□ -0.19
RUNX1-213ENST00000469087 PIK3CAP42336 1068 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 GUCY2FP51841 1108 aa13.83□□□□□ -0.19
RUNX1-213ENST00000469087 MYL6P60660 151 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms