RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 TUBA3EQ6PEY2 450 aa7.06□□□□□ -1.28
XRN1-207ENST00000468894 UBE3BQ7Z3V4 1068 aa7.06□□□□□ -1.28
XRN1-207ENST00000468894 NUP88Q99567 741 aaPredicted RBP7.06□□□□□ -1.28
XRN1-207ENST00000468894 TEX101Q9BY14 249 aa7.06□□□□□ -1.28
XRN1-207ENST00000468894 C11orf54Q9H0W9 315 aaPredicted RBP7.06□□□□□ -1.28
XRN1-207ENST00000468894 E2F8A0AVK6 867 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 ZNF185O15231 689 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 S100BP04271 92 aaPredicted RBP7.05□□□□□ -1.28
XRN1-207ENST00000468894 POU2F2P09086 479 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 C6P13671 934 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 SLC6A2P23975 617 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 ZNF280AP59817 542 aaPredicted RBP7.05□□□□□ -1.28
XRN1-207ENST00000468894 TLE1Q04724 770 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 LSM12Q3MHD2 195 aaKnown RBP7.05□□□□□ -1.28
XRN1-207ENST00000468894 PPP4R3AQ6IN85 833 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 GDF7Q7Z4P5 450 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 PRR18Q8N4B5 295 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 CLPTM1LQ96KA5 538 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 DCLRE1CQ96SD1 692 aaKnown RBP7.05□□□□□ -1.28
XRN1-207ENST00000468894 ZNF341Q9BYN7 854 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 GTPBP4Q9BZE4 634 aaKnown RBP7.05□□□□□ -1.28
XRN1-207ENST00000468894 CDH19Q9H159 772 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 TRPM5Q9NZQ8 1165 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 FAM30AQ9NZY2 134 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 ANKRD6Q9Y2G4 727 aa7.05□□□□□ -1.28
XRN1-207ENST00000468894 TCRBV7S2A1N4TA0A589 114 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 NPIPB8E9PQR5 432 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 RECQL4O94761 1208 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 POMCP01189 267 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 ITGB1P05556 798 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 PDCP20941 246 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 RAB39AQ14964 217 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 UBXN2BQ14CS0 331 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 PDCD4Q53EL6 469 aaKnown RBP7.04□□□□□ -1.28
XRN1-207ENST00000468894 USP45Q70EL2 814 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 MED25Q71SY5 747 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 ZNF276Q8N554 614 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 SLC25A43Q8WUT9 341 aaPredicted RBP7.04□□□□□ -1.28
XRN1-207ENST00000468894 PHACTR3Q96KR7 559 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 GPRC5BQ9NZH0 403 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 ZNF180Q9UJW8 692 aa7.04□□□□□ -1.28
XRN1-207ENST00000468894 LRRC14BA6NHZ5 514 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 KIAA0391O15091 583 aaKnown RBP7.03□□□□□ -1.28
XRN1-207ENST00000468894 GRM6O15303 877 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 DTNBO60941 627 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 ZNF202O95125 648 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 PEX11BO96011 259 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 SBK3P0C264 359 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 SLC6A4P31645 630 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 AGAP9Q5VTM2 703 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 TTC7BQ86TV6 843 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 ZFPM1Q8IX07 1006 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 RHOT2Q8IXI1 618 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 JPH3Q8WXH2 748 aaPredicted RBP7.03□□□□□ -1.28
XRN1-207ENST00000468894 CAMKK2Q96RR4 588 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 SLC46A2Q9BY10 475 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 SLC2A4RGQ9NR83 387 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 ZIM2Q9NZV7 527 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 CALCOCO1Q9P1Z2 691 aa7.03□□□□□ -1.28
XRN1-207ENST00000468894 USP15Q9Y4E8 981 aaPredicted RBP7.03□□□□□ -1.28
XRN1-207ENST00000468894 DIRC3C9JPN6 131 aa7.02□□□□□ -1.29
XRN1-207ENST00000468894 NARSO43776 548 aaKnown RBP7.02□□□□□ -1.29
XRN1-207ENST00000468894 RPS6KA4O75676 772 aa7.02□□□□□ -1.29
XRN1-207ENST00000468894 PRSS23O95084 383 aa7.02□□□□□ -1.29
XRN1-207ENST00000468894 CD1AP06126 327 aa7.02□□□□□ -1.29
XRN1-207ENST00000468894 CT47B1P0C2W7 299 aaPredicted RBP7.02□□□□□ -1.29
XRN1-207ENST00000468894 AKAP5P24588 427 aa7.02□□□□□ -1.29
XRN1-207ENST00000468894 ZXDAP98168 799 aa7.02□□□□□ -1.29
XRN1-207ENST00000468894 CREMQ03060 361 aa7.02□□□□□ -1.29
XRN1-207ENST00000468894 GADL1Q6ZQY3 521 aa7.02□□□□□ -1.29
XRN1-207ENST00000468894 ZNF483Q8TF39 744 aaPredicted RBP7.02□□□□□ -1.29
XRN1-207ENST00000468894 FAM193BQ96PV7 902 aaPredicted RBP7.02□□□□□ -1.29
XRN1-207ENST00000468894 VRK1Q99986 396 aaPredicted RBP7.02□□□□□ -1.29
XRN1-207ENST00000468894 SLC12A5Q9H2X9 1139 aa7.02□□□□□ -1.29
XRN1-207ENST00000468894 PNMA8BQ9ULN7 279 aaPredicted RBP7.02□□□□□ -1.29
XRN1-207ENST00000468894 CDHR4A6H8M9 788 aa7.01□□□□□ -1.29
XRN1-207ENST00000468894 NCR1O76036 304 aa7.01□□□□□ -1.29
XRN1-207ENST00000468894 RPLP2P05387 115 aaKnown RBP7.01□□□□□ -1.29
XRN1-207ENST00000468894 ALAS1P13196 640 aa7.01□□□□□ -1.29
XRN1-207ENST00000468894 VCAM1P19320 739 aa7.01□□□□□ -1.29
XRN1-207ENST00000468894 KHDC1Q4VXA5 237 aaKnown RBP7.01□□□□□ -1.29
XRN1-207ENST00000468894 PABPC1LQ4VXU2 614 aaKnown RBP7.01□□□□□ -1.29
XRN1-207ENST00000468894 RHOUQ7L0Q8 258 aa7.01□□□□□ -1.29
XRN1-207ENST00000468894 OR56A1Q8NGH5 318 aa7.01□□□□□ -1.29
XRN1-207ENST00000468894 JDP2Q8WYK2 163 aa7.01□□□□□ -1.29
XRN1-207ENST00000468894 KLHL11Q9NVR0 708 aa7.01□□□□□ -1.29
XRN1-207ENST00000468894 CCDC78A2IDD5 438 aa7□□□□□ -1.29
XRN1-207ENST00000468894 MARCH11A6NNE9 402 aa7□□□□□ -1.29
XRN1-207ENST00000468894 NT5C1B-RDH14C9J2C7 533 aa7□□□□□ -1.29
XRN1-207ENST00000468894 RFPL1O75677 317 aa7□□□□□ -1.29
XRN1-207ENST00000468894 HAUS5O94927 633 aa7□□□□□ -1.29
XRN1-207ENST00000468894 SCGB1D2O95969 90 aa7□□□□□ -1.29
XRN1-207ENST00000468894 MALP21145 153 aa7□□□□□ -1.29
XRN1-207ENST00000468894 GCSHP23434 173 aa7□□□□□ -1.29
XRN1-207ENST00000468894 LRRC41Q15345 812 aa7□□□□□ -1.29
XRN1-207ENST00000468894 ATP2B3Q16720 1220 aa7□□□□□ -1.29
XRN1-207ENST00000468894 PGS1Q32NB8 556 aa7□□□□□ -1.29
XRN1-207ENST00000468894 FLYWCH1Q4VC44 716 aa7□□□□□ -1.29
XRN1-207ENST00000468894 LRRC55Q6ZSA7 311 aa7□□□□□ -1.29
XRN1-207ENST00000468894 TPH2Q8IWU9 490 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms