RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 TMEM192Q8IY95 271 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 TATDN2Q93075 761 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 FAM81BQ96LP2 452 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 KREMEN1Q96MU8 473 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 SAGE1Q9NXZ1 904 aa20.46■□□□□ 0.87
SMC4-209ENST00000468653 RCCD1A6NED2 376 aa20.45■□□□□ 0.86
SMC4-209ENST00000468653 CLSTN1O94985 981 aa20.45■□□□□ 0.86
SMC4-209ENST00000468653 CXCL8P10145 99 aa20.45■□□□□ 0.86
SMC4-209ENST00000468653 EIF4BP23588 611 aaKnown RBP20.45■□□□□ 0.86
SMC4-209ENST00000468653 CST5P28325 142 aaPredicted RBP20.45■□□□□ 0.86
SMC4-209ENST00000468653 TFAMQ00059 246 aaKnown RBP20.45■□□□□ 0.86
SMC4-209ENST00000468653 ENOSF1Q7L5Y1 443 aa20.45■□□□□ 0.86
SMC4-209ENST00000468653 PCSK9Q8NBP7 692 aaKnown RBP20.45■□□□□ 0.86
SMC4-209ENST00000468653 ELMO3Q96BJ8 720 aa20.45■□□□□ 0.86
SMC4-209ENST00000468653 WDR24Q96S15 920 aa20.45■□□□□ 0.86
SMC4-209ENST00000468653 LACRTQ9GZZ8 138 aa20.45■□□□□ 0.86
SMC4-209ENST00000468653 TRIP12Q14669 1992 aaPredicted RBP20.45■□□□□ 0.86
SMC4-209ENST00000468653 B4GALT4O60513 344 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 TMEM191BP0C7N4 346 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 CRYBB1P53674 252 aaPredicted RBP20.44■□□□□ 0.86
SMC4-209ENST00000468653 NCOA4Q13772 614 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 SNX17Q15036 470 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 DCAF4L1Q3SXM0 396 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 RNF180Q86T96 592 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 MTMR12Q9C0I1 747 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 MYO1AQ9UBC5 1043 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 SCN10AQ9Y5Y9 1956 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 TNNC2P02585 160 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 PRMT2P55345 433 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 POU5F1Q01860 360 aaKnown RBP20.44■□□□□ 0.86
SMC4-209ENST00000468653 GCNT1Q02742 428 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 BMS1Q14692 1282 aaKnown RBP20.44■□□□□ 0.86
SMC4-209ENST00000468653 GDF6Q6KF10 455 aaPredicted RBP20.44■□□□□ 0.86
SMC4-209ENST00000468653 TRAPPC11Q7Z392 1133 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 RSPH3Q86UC2 560 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 SHC3Q92529 594 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 ANKRD36BP1Q96IX9 119 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 IMPG2Q9BZV3 1241 aa20.44■□□□□ 0.86
SMC4-209ENST00000468653 M0QZ92 97 aa20.43■□□□□ 0.86
SMC4-209ENST00000468653 HOXA11P31270 313 aaPredicted RBP20.43■□□□□ 0.86
SMC4-209ENST00000468653 C10orf76Q5T2E6 689 aa20.43■□□□□ 0.86
SMC4-209ENST00000468653 CCSAPQ6IQ19 270 aaPredicted RBP20.43■□□□□ 0.86
SMC4-209ENST00000468653 NOTUMQ6P988 496 aa20.43■□□□□ 0.86
SMC4-209ENST00000468653 FAM71AQ8IYT1 594 aa20.43■□□□□ 0.86
SMC4-209ENST00000468653 SLAIN1Q8ND83 568 aa20.43■□□□□ 0.86
SMC4-209ENST00000468653 ACAP3Q96P50 834 aa20.43■□□□□ 0.86
SMC4-209ENST00000468653 LACTBL1A8MY62 500 aa20.42■□□□□ 0.86
SMC4-209ENST00000468653 NPTXRO95502 500 aa20.42■□□□□ 0.86
SMC4-209ENST00000468653 INHAP05111 366 aa20.42■□□□□ 0.86
SMC4-209ENST00000468653 TNFAIP3P21580 790 aa20.42■□□□□ 0.86
SMC4-209ENST00000468653 AXLP30530 894 aa20.42■□□□□ 0.86
SMC4-209ENST00000468653 TRPC3Q13507 836 aa20.42■□□□□ 0.86
SMC4-209ENST00000468653 SLC27A1Q6PCB7 646 aa20.42■□□□□ 0.86
SMC4-209ENST00000468653 EFCAB13Q8IY85 973 aa20.42■□□□□ 0.86
SMC4-209ENST00000468653 TMEM40Q8WWA1 233 aa20.42■□□□□ 0.86
SMC4-209ENST00000468653 CCDC94Q9BW85 323 aaPredicted RBP20.42■□□□□ 0.86
SMC4-209ENST00000468653 CELF4Q9BZC1 486 aaKnown RBP20.42■□□□□ 0.86
SMC4-209ENST00000468653 DDX3XO00571 662 aaKnown RBP eCLIP20.41■□□□□ 0.864e-78■■■■■ 527.9
SMC4-209ENST00000468653 GRM5P41594 1212 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 SPOPLQ6IQ16 392 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 ALKBH5Q6P6C2 394 aaKnown RBP20.41■□□□□ 0.86
SMC4-209ENST00000468653 SLC35F6Q8N357 371 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 ASB7Q9H672 318 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 NAGPAQ9UK23 515 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 DUSP10Q9Y6W6 482 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 MACROD2A1Z1Q3 448 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 PJA2O43164 708 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 CYP26A1O43174 497 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 CST3P01034 146 aaPredicted RBP20.41■□□□□ 0.86
SMC4-209ENST00000468653 KRT5P13647 590 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 GRK4P32298 578 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 NOP14P78316 857 aaKnown RBP20.41■□□□□ 0.86
SMC4-209ENST00000468653 MRPS6P82932 125 aaKnown RBP20.41■□□□□ 0.86
SMC4-209ENST00000468653 NAB2Q15742 525 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 SESTD1Q86VW0 696 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 GLYCTKQ8IVS8 523 aa20.41■□□□□ 0.86
SMC4-209ENST00000468653 U2AF1L4Q8WU68 220 aaKnown RBP20.41■□□□□ 0.86
SMC4-209ENST00000468653 SECISBP2LQ93073 1101 aaKnown RBP20.41■□□□□ 0.86
SMC4-209ENST00000468653 HMX1Q9NP08 348 aaPredicted RBP20.41■□□□□ 0.86
SMC4-209ENST00000468653 SEPT11Q9NVA2 429 aaKnown RBP20.41■□□□□ 0.86
SMC4-209ENST00000468653 PIN4Q9Y237 131 aaKnown RBP20.41■□□□□ 0.86
SMC4-209ENST00000468653 MROH7Q68CQ1 1323 aa20.4■□□□□ 0.86
SMC4-209ENST00000468653 FANCGO15287 622 aa20.4■□□□□ 0.86
SMC4-209ENST00000468653 CABYRO75952 493 aa20.4■□□□□ 0.86
SMC4-209ENST00000468653 TBXAS1P24557 533 aaPredicted RBP20.4■□□□□ 0.86
SMC4-209ENST00000468653 SLC10A6Q3KNW5 377 aa20.4■□□□□ 0.86
SMC4-209ENST00000468653 JADE1Q6IE81 842 aa20.4■□□□□ 0.86
SMC4-209ENST00000468653 SERINC5Q86VE9 423 aa20.4■□□□□ 0.86
SMC4-209ENST00000468653 LNX1Q8TBB1 728 aaPredicted RBP20.4■□□□□ 0.86
SMC4-209ENST00000468653 DHX38Q92620 1227 aaKnown RBP20.4■□□□□ 0.86
SMC4-209ENST00000468653 AGPAT1Q99943 283 aa20.4■□□□□ 0.86
SMC4-209ENST00000468653 TRIM6Q9C030 488 aaPredicted RBP20.4■□□□□ 0.86
SMC4-209ENST00000468653 APOBEC3GQ9HC16 384 aaKnown RBP20.4■□□□□ 0.86
SMC4-209ENST00000468653 THSD7BQ9C0I4 1608 aa20.4■□□□□ 0.86
SMC4-209ENST00000468653 RIOK3O14730 519 aaKnown RBP20.39■□□□□ 0.86
SMC4-209ENST00000468653 URI1O94763 535 aaPredicted RBP20.39■□□□□ 0.86
SMC4-209ENST00000468653 SGPL1O95470 568 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 NFICP08651 508 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 MYL6P60660 151 aa20.39■□□□□ 0.86
SMC4-209ENST00000468653 CUL2Q13617 745 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms