RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 SLC4A7Q9Y6M7 1214 aa12.22□□□□□ -0.45
MSH5-214ENST00000468602 ANO9A1A5B4 782 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 GOLGA8IPA6NC78 632 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 GOLGA8JA6NMD2 632 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 LRRIQ3A6PVS8 624 aaPredicted RBP12.21□□□□□ -0.45
MSH5-214ENST00000468602 MEIS3P2A8K0S8 358 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 BECN2A8MW95 431 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 C4BPAP04003 597 aaKnown RBP12.21□□□□□ -0.45
MSH5-214ENST00000468602 THP07101 528 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 KRT13P13646 458 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 AKAP5P24588 427 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 RPL9P32969 192 aaKnown RBP12.21□□□□□ -0.45
MSH5-214ENST00000468602 WNT7BP56706 349 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 DEFB103AP81534 67 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 MAN2A1Q16706 1144 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 DUOXA2Q1HG44 320 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 ZACNQ401N2 412 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 NOMO2Q5JPE7 1267 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 CEP135Q66GS9 1140 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 GAS2L3Q86XJ1 694 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 HERC6Q8IVU3 1022 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 CACTINQ8WUQ7 758 aaKnown RBP12.21□□□□□ -0.45
MSH5-214ENST00000468602 CLP1Q92989 425 aaKnown RBP12.21□□□□□ -0.45
MSH5-214ENST00000468602 DDX27Q96GQ7 796 aaKnown RBP12.21□□□□□ -0.45
MSH5-214ENST00000468602 ZMAT2Q96NC0 199 aaKnown RBP12.21□□□□□ -0.45
MSH5-214ENST00000468602 RAD9AQ99638 391 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 TMEM175Q9BSA9 504 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 TMEM8AQ9HCN3 771 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 PDE11AQ9HCR9 933 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 INSL6Q9Y581 213 aa12.21□□□□□ -0.45
MSH5-214ENST00000468602 TDRD15B5MCY1 1934 aaKnown RBP12.21□□□□□ -0.46
MSH5-214ENST00000468602 KCNJ18B7U540 433 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 N4BP1O75113 896 aaKnown RBP12.2□□□□□ -0.46
MSH5-214ENST00000468602 EFEMP2O95967 443 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 FAM163BP0C2L3 166 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 LINC00271P0C7V0 271 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 ATP2A2P16615 1042 aaKnown RBP12.2□□□□□ -0.46
MSH5-214ENST00000468602 MLH1P40692 756 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 TPM4P67936 248 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 TUSC3Q13454 348 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 KCNJ12Q14500 433 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 SHHQ15465 462 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 TPD52L1Q16890 204 aaPredicted RBP12.2□□□□□ -0.46
MSH5-214ENST00000468602 SEZ6Q53EL9 994 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 MIIPQ5JXC2 388 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 C9orf50Q5SZB4 431 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 KRT39Q6A163 491 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 SARM1Q6SZW1 724 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 LUZP1Q86V48 1076 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 EFCAB13Q8IY85 973 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 COLGALT2Q8IYK4 626 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 LRRC43Q8N309 656 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 URGCPQ8TCY9 931 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 ZNF516Q92618 1163 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 LPPQ93052 612 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 FNBP1Q96RU3 617 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 GAD1Q99259 594 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 TUBGCP2Q9BSJ2 902 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 TBC1D13Q9NVG8 400 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 MIOSQ9NXC5 875 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 PARP2Q9UGN5 583 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 ITGA11Q9UKX5 1188 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 LRFN2Q9ULH4 789 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 DAAM1Q9Y4D1 1078 aa12.2□□□□□ -0.46
MSH5-214ENST00000468602 PIRO00625 290 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 FGFR1P11362 822 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 ATICP31939 592 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 AARSP49588 968 aaKnown RBP eCLIP12.19□□□□□ -0.463e-6■■■■■ 61.8
MSH5-214ENST00000468602 PPP3CAQ08209 521 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 TMEM132DQ14C87 1099 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 KRT31Q15323 416 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 CCDC40Q4G0X9 1142 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 JADE1Q6IE81 842 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 SV2AQ7L0J3 742 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 LIMS2Q7Z4I7 341 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 GPR65Q8IYL9 337 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 TDHQ8IZJ6 230 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 LRRC52Q8N7C0 313 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 ANKRD20A12PQ8NF67 263 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 TAF4BQ92750 862 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 ANKRD36BP1Q96IX9 119 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 ZFP42Q96MM3 310 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 RPS6KC1Q96S38 1066 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 UBE2OQ9C0C9 1292 aaKnown RBP12.19□□□□□ -0.46
MSH5-214ENST00000468602 CWH43Q9H720 699 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 MAGEC2Q9UBF1 373 aaPredicted RBP12.19□□□□□ -0.46
MSH5-214ENST00000468602 STK39Q9UEW8 545 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 PLAGL2Q9UPG8 496 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 PCDHA11Q9Y5I1 949 aa12.19□□□□□ -0.46
MSH5-214ENST00000468602 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.19□□□□□ -0.46
MSH5-214ENST00000468602 PTPRJQ12913 1337 aa12.18□□□□□ -0.46
MSH5-214ENST00000468602 A0A1B0GTH6 734 aa12.18□□□□□ -0.46
MSH5-214ENST00000468602 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.18□□□□□ -0.46
MSH5-214ENST00000468602 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.18□□□□□ -0.46
MSH5-214ENST00000468602 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
MSH5-214ENST00000468602 C5orf67F2Z3F1 127 aa12.18□□□□□ -0.46
MSH5-214ENST00000468602 GOLGA6L19H0YKK7 550 aa12.18□□□□□ -0.46
MSH5-214ENST00000468602 ZC3H11AO75152 810 aaKnown RBP eCLIP12.18□□□□□ -0.46
MSH5-214ENST00000468602 NFICP08651 508 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms