RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ENGP17813 658 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 DHPSP49366 369 aaPredicted RBP13.09□□□□□ -0.31
VPS26A-204ENST00000467852 DNM2P50570 870 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 CYP4F3Q08477 520 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 RAB33AQ14088 237 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 UBE2SQ16763 222 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 ZNF410Q86VK4 478 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 LNX1Q8TBB1 728 aaPredicted RBP13.09□□□□□ -0.31
VPS26A-204ENST00000467852 HHIPQ96QV1 700 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 GAD1Q99259 594 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 CORO1BQ9BR76 489 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 PRORYQ9H606 182 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 ZBTB40Q9NUA8 1239 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 GABBR1Q9UBS5 961 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 ADAMTS9Q9P2N4 1935 aa13.09□□□□□ -0.31
VPS26A-204ENST00000467852 KIF26AQ9ULI4 1882 aaPredicted RBP13.08□□□□□ -0.32
VPS26A-204ENST00000467852 COL12A1Q99715 3063 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 OPHN1O60890 802 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 PSAPP07602 524 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 FTH1P19P0C7X4 201 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 OR1D2P34982 312 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 SCNN1GP51170 649 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 MAPK6Q16659 721 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 USP39Q53GS9 565 aaKnown RBP13.08□□□□□ -0.32
VPS26A-204ENST00000467852 CYP4A22Q5TCH4 519 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 FAM171A1Q5VUB5 890 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 PDZD4Q76G19 769 aaPredicted RBP13.08□□□□□ -0.32
VPS26A-204ENST00000467852 PNPLA1Q8N8W4 532 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 TTC8Q8TAM2 541 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 TCEAL4Q96EI5 215 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 ZSWIM3Q96MP5 696 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 TRPV4Q9HBA0 871 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 AGPAT5Q9NUQ2 364 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 EBF1Q9UH73 591 aa13.08□□□□□ -0.32
VPS26A-204ENST00000467852 MEIS1O00470 390 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 ADAM12O43184 909 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 APBB3O95704 486 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 MLH1P40692 756 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 SPIRE1Q08AE8 756 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 SEC23AQ15436 765 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 HAUS6Q7Z4H7 955 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 PLEKHM2Q8IWE5 1019 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 SMAP1Q8IYB5 467 aaPredicted RBP13.07□□□□□ -0.32
VPS26A-204ENST00000467852 ZSCAN18Q8TBC5 510 aaPredicted RBP13.07□□□□□ -0.32
VPS26A-204ENST00000467852 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 TMEM209Q96SK2 561 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
VPS26A-204ENST00000467852 CNNM2Q9H8M5 875 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 MIOSQ9NXC5 875 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 DDX19BQ9UMR2 479 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 APOBEC2Q9Y235 224 aaKnown RBP13.07□□□□□ -0.32
VPS26A-204ENST00000467852 INVSQ9Y283 1065 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 PCDHA10Q9Y5I2 948 aa13.07□□□□□ -0.32
VPS26A-204ENST00000467852 PTPRQQ9UMZ3 2332 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 A0A0D9SFI3 127 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 PYCARD-AS1I3L0S3 204 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 MS4A1P11836 297 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 ZNF76P36508 570 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 DGKEP52429 567 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 GRSF1Q12849 480 aaKnown RBP eCLIP13.06□□□□□ -0.32
VPS26A-204ENST00000467852 ZNF746Q6NUN9 644 aaPredicted RBP13.06□□□□□ -0.32
VPS26A-204ENST00000467852 KRT25Q7Z3Z0 450 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
VPS26A-204ENST00000467852 RHPN2Q8IUC4 686 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 FAM181AQ8N9Y4 354 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 RABGGTAQ92696 567 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 EVI5LQ96CN4 794 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 FCRL3Q96P31 734 aaPredicted RBP13.06□□□□□ -0.32
VPS26A-204ENST00000467852 GTPBP2Q9BX10 602 aaKnown RBP13.06□□□□□ -0.32
VPS26A-204ENST00000467852 GTSE1Q9NYZ3 720 aa13.06□□□□□ -0.32
VPS26A-204ENST00000467852 SEPT9Q9UHD8 586 aaPredicted RBP13.06□□□□□ -0.32
VPS26A-204ENST00000467852 MBD1Q9UIS9 605 aaPredicted RBP13.06□□□□□ -0.32
VPS26A-204ENST00000467852 TEX51A0A1B0GUA7 166 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 OATP04181 439 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 ELF1P32519 619 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 DPP6P42658 865 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 MFAP1P55081 439 aaKnown RBP13.05□□□□□ -0.32
VPS26A-204ENST00000467852 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 ELAVL2Q12926 359 aaKnown RBP13.05□□□□□ -0.32
VPS26A-204ENST00000467852 DRP2Q13474 957 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 HSP90AA2PQ14568 343 aaPredicted RBP13.05□□□□□ -0.32
VPS26A-204ENST00000467852 PTPAQ15257 358 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 UBXN11Q5T124 520 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 SLC23A3Q6PIS1 610 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 LRRC69Q6ZNQ3 347 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 SMG8Q8ND04 991 aaKnown RBP13.05□□□□□ -0.32
VPS26A-204ENST00000467852 ZFP42Q96MM3 310 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 KIF2CQ99661 725 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 LARP6Q9BRS8 491 aaKnown RBP13.05□□□□□ -0.32
VPS26A-204ENST00000467852 GPR88Q9GZN0 384 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 SLITRK6Q9H5Y7 841 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 POLMQ9NP87 494 aaPredicted RBP13.05□□□□□ -0.32
VPS26A-204ENST00000467852 SAMM50Q9Y512 469 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 IPPQ9Y573 584 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 DOPEY2Q9Y3R5 2298 aa13.05□□□□□ -0.32
VPS26A-204ENST00000467852 ARHGEF37A1IGU5 675 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 TRABD2BA6NFA1 517 aa13.04□□□□□ -0.32
VPS26A-204ENST00000467852 IPO5O00410 1097 aaKnown RBP13.04□□□□□ -0.32
VPS26A-204ENST00000467852 DHX15O43143 795 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms