RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 STAG3L1P0CL83 205 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 RARBP10826 455 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 PRKAR2AP13861 404 aaKnown RBP20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 AP3M2P53677 418 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 CDC42EP1Q00587 391 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 WDR44Q5JSH3 913 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 EFCAB13Q8IY85 973 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 TXLNBQ8N3L3 684 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 NAPGQ99747 312 aaPredicted RBP20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 GCOM2Q9BZD3 368 aaPredicted RBP20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 ACP6Q9NPH0 428 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 SRRDQ9UH36 339 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 TRIP12Q14669 1992 aaPredicted RBP20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 KPNA6O60684 536 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 MOCS3O95396 460 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 CST3P01034 146 aaPredicted RBP20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 VEGFBP49765 207 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 NCOA4Q13772 614 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 SURF1Q15526 300 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 C10orf76Q5T2E6 689 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 TRAPPC11Q7Z392 1133 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 U2AF1L4Q8WU68 220 aaKnown RBP20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 MTG1Q9BT17 334 aaPredicted RBP20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 RPF1Q9H9Y2 349 aaKnown RBP20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 MRFAP1Q9Y605 127 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 DNAH12Q6ZR08 3092 aa20.23■□□□□ 0.83
CHRNA4-203ENST00000467563 B4GALT4O60513 344 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 PHACTR2O75167 634 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 ADAMTS4O75173 837 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 SGPL1O95470 568 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 CLTAP09496 248 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 NKX3-2P78367 333 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 DUOXA2Q1HG44 320 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 ENOSF1Q7L5Y1 443 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 SLC47A2Q86VL8 602 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 PALB2Q86YC2 1186 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 TSC1Q92574 1164 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 AGPAT1Q99943 283 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 CTIFO43310 598 aaKnown RBP20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 DARSP14868 501 aaKnown RBP20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 HOXA11P31270 313 aaPredicted RBP20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 HTRA3P83110 453 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 TFAMQ00059 246 aaKnown RBP20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 LRRN4CLQ8ND94 238 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 EPS8L1Q8TE68 723 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 SPC25Q9HBM1 224 aa20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 NOCTQ9UK39 431 aaKnown RBP20.22■□□□□ 0.83
CHRNA4-203ENST00000467563 UMODL1Q5DID0 1318 aa20.21■□□□□ 0.83
CHRNA4-203ENST00000467563 ENC1O14682 589 aa20.21■□□□□ 0.83
CHRNA4-203ENST00000467563 MAP2K2P36507 400 aa20.21■□□□□ 0.83
CHRNA4-203ENST00000467563 NOP14P78316 857 aaKnown RBP20.21■□□□□ 0.83
CHRNA4-203ENST00000467563 NOP9Q86U38 636 aaKnown RBP20.21■□□□□ 0.83
CHRNA4-203ENST00000467563 TMEM40Q8WWA1 233 aa20.21■□□□□ 0.83
CHRNA4-203ENST00000467563 XPNPEP3Q9NQH7 507 aa20.21■□□□□ 0.83
CHRNA4-203ENST00000467563 NUB1Q9Y5A7 615 aa20.21■□□□□ 0.83
CHRNA4-203ENST00000467563 LACTBL1A8MY62 500 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 BUB1O43683 1085 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 IL18RAPO95256 599 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 SLU7O95391 586 aaKnown RBP20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 GNAT1P11488 350 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 TNFAIP3P21580 790 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 NBPF20Q3BBV1 942 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 CATSPER4Q7RTX7 472 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 TRIM58Q8NG06 486 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 FAM81BQ96LP2 452 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 SCN10AQ9Y5Y9 1956 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 ANK1P16157 1881 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 ATP1A1P05023 1023 aaKnown RBP20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 CHRNB2P17787 502 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 EIF4BP23588 611 aaKnown RBP20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 RPUSD2Q8IZ73 545 aaKnown RBP20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 RNF10Q8N5U6 811 aaKnown RBP20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 SEPT11Q9NVA2 429 aaKnown RBP20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 TAS2R14Q9NYV8 317 aa20.2■□□□□ 0.82
CHRNA4-203ENST00000467563 BRCA2P51587 3418 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 TMCO5BA8MYB1 307 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 TACC1O75410 805 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 ASS1P00966 412 aaKnown RBP20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 NFICP08651 508 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 TMEM191BP0C7N4 346 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 CYP11B1P15538 503 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 MYL6P60660 151 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 AMPD2Q01433 879 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 CUL2Q13617 745 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 SNX17Q15036 470 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 SLC10A6Q3KNW5 377 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 NOX5Q96PH1 765 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 ADPGKQ9BRR6 497 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 GTF2IRD1Q9UHL9 959 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 ATP8B3O60423 1300 aa20.19■□□□□ 0.82
CHRNA4-203ENST00000467563 H2AFZP0C0S5 128 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 KRT5P13647 590 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 ACO1P21399 889 aaKnown RBP20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 HOXD10P28358 340 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 MAP3K21Q5TCX8 1036 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 TAF3Q5VWG9 929 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 H2AFVQ71UI9 128 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 TMEM130Q8N3G9 435 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 FAM170AA1A519 330 aa20.18■□□□□ 0.82
CHRNA4-203ENST00000467563 BTNL10A8MVZ5 291 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms