RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 MTHFD2P13995 350 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 POU3F3P20264 500 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 FGFR4P22455 802 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 SLC6A2P23975 617 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 SOX5P35711 763 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 CXADRP78310 365 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 MPP3Q13368 585 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 MTM1Q13496 603 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 MUM1L1Q5H9M0 696 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 ZNF362Q5T0B9 420 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 MED25Q71SY5 747 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 PQLC1Q8N2U9 271 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 SLC44A3Q8N4M1 653 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 FATE1Q969F0 183 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 NACC2Q96BF6 587 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 C14orf119Q9NWQ9 140 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 KCNE5Q9UJ90 142 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 AJAP1Q9UKB5 411 aaPredicted RBP4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 ATP11BQ9Y2G3 1177 aa4.23□□□□□ -1.73
GTF3C3-209ENST00000466862 MASP2O00187 686 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 C1QL1O75973 258 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 FOSP01100 380 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 AMY1AP04745 511 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 ZNF37AP17032 561 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 PLA2G5P39877 138 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 MASP1P48740 699 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 PTH2RP49190 550 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 MRPS21P82921 87 aaKnown RBP4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 TMPRSS15P98073 1019 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 ATP8B2P98198 1209 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 STRIP1Q5VSL9 837 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 CHAC2Q8WUX2 184 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 CAVIN3Q969G5 261 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 MYOCQ99972 504 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 FAM126AQ9BYI3 521 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 ALOXE3Q9BYJ1 711 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 RNPEPQ9H4A4 650 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 LDAHQ9H6V9 325 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 WDR26Q9H7D7 661 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 ZNF277Q9NRM2 450 aaPredicted RBP4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 MOCS1Q9NZB8 636 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 USP25Q9UHP3 1055 aa4.22□□□□□ -1.73
GTF3C3-209ENST00000466862 GOLGA8AA7E2F4 631 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 GPR39O43194 453 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 ENDOD1O94919 500 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 RAP2AP10114 183 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 IL2RBP14784 551 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 ATP5JP18859 108 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 SCAND1P57086 179 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 SIM1P81133 766 aaPredicted RBP4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 SLFN5Q08AF3 891 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 CYP2A13Q16696 494 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 TAF7LQ5H9L4 462 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 TSHZ3Q63HK5 1081 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 GIMAP6Q6P9H5 292 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 ZGPATQ8N5A5 531 aaKnown RBP4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 SLC9A6Q92581 669 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 BOD1Q96IK1 185 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 PHACTR3Q96KR7 559 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 Q96MF0 132 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 UHRF1Q96T88 793 aaPredicted RBP4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 FOXJ2Q9P0K8 574 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 HSFX1Q9UBD0 423 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 ACTL7AQ9Y615 435 aa4.21□□□□□ -1.74
GTF3C3-209ENST00000466862 ARHGEF17Q96PE2 2063 aaPredicted RBP4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 AATKQ6ZMQ8 1374 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 TLDC2A0PJX2 215 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 GPR32O75388 356 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 OSMP13725 252 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 HSD3B2P26439 372 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 CXCR5P32302 372 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 HSD11B2P80365 405 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 ZNF169Q14929 603 aaPredicted RBP4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 SDE2Q6IQ49 451 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 ZNF529Q6P280 563 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 FBXO42Q6P3S6 717 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 Q6ZNX1 250 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 KRT26Q7Z3Y9 468 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 DCBLD1Q8N8Z6 715 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 BOLLQ8N9W6 283 aaKnown RBP4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 Q8NA96 180 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 COG1Q8WTW3 980 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 RNF31Q96EP0 1072 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 LRFN3Q9BTN0 628 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 SENP6Q9GZR1 1112 aaPredicted RBP4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 UNKLQ9H9P5 680 aaKnown RBP4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 DNAJC28Q9NX36 388 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 INSL6Q9Y581 213 aa4.2□□□□□ -1.74
GTF3C3-209ENST00000466862 INO80B-WBP1J3KQ70 363 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 POMCP01189 267 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 AGXTP21549 392 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 LMO1P25800 156 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 VAV2P52735 878 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 SLC5A3P53794 718 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 MXRA7P84157 204 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 UBXN2BQ14CS0 331 aa4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 NPM2Q86SE8 214 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 SPATS2Q86XZ4 545 aaKnown RBP4.19□□□□□ -1.74
GTF3C3-209ENST00000466862 STON2Q8WXE9 905 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms