RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 NEURL4Q96JN8 1562 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 TLR2O60603 784 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 BCAR1P56945 870 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 CCDC85BQ15834 202 aaPredicted RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 CYFIP1Q7L576 1253 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 BTN2A2Q8WVV5 523 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 C6orf203Q9P0P8 240 aaPredicted RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 TTC7AQ9ULT0 858 aaPredicted RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 AP3B1O00203 1094 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 ARHGEF9O43307 516 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 SUPT3HO75486 399 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 PRKCBP05771 671 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 KRT4P19013 534 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 CHRNA3P32297 505 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 SKOR1P84550 965 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 AP1ARQ63HQ0 302 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 ENOSF1Q7L5Y1 443 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 OPTNQ96CV9 577 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 SAAL1Q96ER3 474 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 SEPT5Q99719 369 aaPredicted RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 PARVAQ9NVD7 372 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 NDE1Q9NXR1 346 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 ADAMTS1Q9UHI8 967 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 CSF1RP07333 972 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 TXNP10599 105 aaKnown RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 AKR1B1P15121 316 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 HDAC4P56524 1084 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 KNOP1Q1ED39 458 aaKnown RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 C1orf146Q5VVC0 180 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 LRRC8EQ6NSJ5 796 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 C16orf87Q6PH81 154 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 ATG9AQ7Z3C6 839 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 GPRC5AQ8NFJ5 357 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 LPAR1Q92633 364 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 AGO2Q9UKV8 859 aaKnown RBP9.19□□□□□ -0.94
HPS4-209ENST00000466781 NFU1Q9UMS0 254 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 TRAF3IP3Q9Y228 551 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 PCDHB7Q9Y5E2 793 aa9.19□□□□□ -0.94
HPS4-209ENST00000466781 HMBSP08397 361 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 EFNA5P52803 228 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 GPS1Q13098 491 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 ORC2Q13416 577 aaPredicted RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 RESP18Q5W5W9 173 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 OXER1Q8TDS5 423 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 DEFB129Q9H1M3 183 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 RRAGDQ9NQL2 400 aaPredicted RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 ATP9BO43861 1147 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 MMEP08473 750 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 DUOXA2Q1HG44 320 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 OOSP2Q86WS3 158 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 CATSPER3Q86XQ3 398 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 ZMAT2Q96NC0 199 aaKnown RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 NRBP1Q9UHY1 535 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 FBXL5Q9UKA1 691 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 PYCARDQ9ULZ3 195 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 POTEB3A0JP26 581 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 LRRC53A6NM62 1247 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 POTECB2RU33 542 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 MAN1A2O60476 641 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 CTSHP09668 335 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 RALBP11234 206 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 GRAMD4Q6IC98 578 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 POTEBQ6S5H4 581 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 NUDCD3Q8IVD9 361 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 SNX31Q8N9S9 440 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 SNX24Q9Y343 169 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 RNF103-CHMP3A0A140T963 221 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 MEFVO15553 781 aaPredicted RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 MFAP3LO75121 409 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 KRT14P02533 472 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 CYP2B6P20813 491 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 CCDC15Q0P6D6 951 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 SPDYAQ5MJ70 313 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 IER5Q5VY09 327 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 IL31Q6EBC2 164 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 ATPAF2Q8N5M1 289 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 ZC4H2Q9NQZ6 224 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 GIMAP4Q9NUV9 329 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 PNPLA7Q6ZV29 1317 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 STXBP3O00186 592 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 PJA2O43164 708 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 ATP5HO75947 161 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 SLC25A27O95847 323 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 VEGFAP15692 232 aaPredicted RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 SSTR3P32745 418 aaPredicted RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 POLE2P56282 527 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 PDIA2Q13087 525 aaKnown RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 EIF2B5Q13144 721 aaKnown RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 LAMB3Q13751 1172 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 TOB2Q14106 344 aaPredicted RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 SMAD1Q15797 465 aaKnown RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 RABL6Q3YEC7 729 aaPredicted RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 KDELC2Q7Z4H8 507 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 TMEM39BQ9GZU3 492 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 WNT8AQ9H1J5 351 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 JPH1Q9HDC5 661 aaPredicted RBP9.18□□□□□ -0.94
HPS4-209ENST00000466781 TMEM161AQ9NX61 479 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 PPP2R3BQ9Y5P8 575 aa9.18□□□□□ -0.94
HPS4-209ENST00000466781 GFAPP14136 432 aa9.17□□□□□ -0.94
HPS4-209ENST00000466781 CENPAP49450 140 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms