RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.16□□□□□ -1.58
CALD1-214ENST00000466704 REXO2Q9Y3B8 237 aaKnown RBP5.16□□□□□ -1.58
CALD1-214ENST00000466704 ARHGEF11O15085 1522 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 LAMC3Q9Y6N6 1575 aa5.16□□□□□ -1.58
CALD1-214ENST00000466704 CFTRP13569 1480 aa5.15□□□□□ -1.58
CALD1-214ENST00000466704 E2F8A0AVK6 867 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 DRGXA6NNA5 263 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 DIRC3C9JPN6 131 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 LEFTY2O00292 366 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 WNT10BO00744 389 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 KIAA0391O15091 583 aaKnown RBP5.15□□□□□ -1.59
CALD1-214ENST00000466704 RPS6KA4O75676 772 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 S100BP04271 92 aaPredicted RBP5.15□□□□□ -1.59
CALD1-214ENST00000466704 SPATA31D3P0C874 917 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 PF4V1P10720 104 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 ALAS1P13196 640 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 CHN2P52757 468 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 CTXN1P60606 82 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 ATP8B2P98198 1209 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 MCL1Q07820 350 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 TARDBPQ13148 414 aaKnown RBP eCLIP5.15□□□□□ -1.59
CALD1-214ENST00000466704 CSRP2Q16527 193 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 SPATA31D4Q6ZUB0 917 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 SEM1Q6ZVN7 128 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 MED25Q71SY5 747 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 UBE3BQ7Z3V4 1068 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 GDF7Q7Z4P5 450 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 TTC7BQ86TV6 843 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 PLXDC1Q8IUK5 500 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 ZNF276Q8N554 614 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 CACTINQ8WUQ7 758 aaKnown RBP5.15□□□□□ -1.59
CALD1-214ENST00000466704 CLPTM1LQ96KA5 538 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 MYOCQ99972 504 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 C11orf54Q9H0W9 315 aaPredicted RBP5.15□□□□□ -1.59
CALD1-214ENST00000466704 ANKRD6Q9Y2G4 727 aa5.15□□□□□ -1.59
CALD1-214ENST00000466704 CFAP20Q9Y6A4 193 aaKnown RBP5.15□□□□□ -1.59
CALD1-214ENST00000466704 NPIPB8E9PQR5 432 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 ITGB1P05556 798 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 C6P13671 934 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 PDCP20941 246 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 TACR2P21452 398 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 EPHB1P54762 984 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 RNASE9P60153 205 aaKnown RBP5.14□□□□□ -1.59
CALD1-214ENST00000466704 SLC25A3Q00325 362 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 PIN1Q13526 163 aaPredicted RBP5.14□□□□□ -1.59
CALD1-214ENST00000466704 RAB39AQ14964 217 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 UBXN2BQ14CS0 331 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 PLEKHG6Q3KR16 790 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 CRIP3Q6Q6R5 217 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 USP51Q70EK9 711 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 SYT12Q8IV01 421 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 SYNE4Q8N205 404 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 SLC25A43Q8WUT9 341 aaPredicted RBP5.14□□□□□ -1.59
CALD1-214ENST00000466704 TCF7L1Q9HCS4 588 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 SLC23A1Q9UHI7 598 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 ZNF180Q9UJW8 692 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 USP15Q9Y4E8 981 aaPredicted RBP5.14□□□□□ -1.59
CALD1-214ENST00000466704 PNPLA7Q6ZV29 1317 aa5.14□□□□□ -1.59
CALD1-214ENST00000466704 WDR62O43379 1518 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 GRXCR1A8MXD5 290 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 ZNF202O95125 648 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 PEX11BO96011 259 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 ZSCAN20P17040 1043 aaPredicted RBP5.13□□□□□ -1.59
CALD1-214ENST00000466704 PTGS2P35354 604 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 RAB27AP51159 221 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 ZXDAP98168 799 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 CATIPQ7Z7H3 387 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 NLGN4YQ8NFZ3 816 aaPredicted RBP5.13□□□□□ -1.59
CALD1-214ENST00000466704 ZNF483Q8TF39 744 aaPredicted RBP5.13□□□□□ -1.59
CALD1-214ENST00000466704 GSTO2Q9H4Y5 243 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 NRDE2Q9H7Z3 1164 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 MAN1C1Q9NR34 630 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 SLC2A4RGQ9NR83 387 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 ATP11BQ9Y2G3 1177 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 PCDHB1Q9Y5F3 818 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 FANCD2Q9BXW9 1451 aa5.13□□□□□ -1.59
CALD1-214ENST00000466704 TCRBV7S2A1N4TA0A589 114 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 ZNF185O15231 689 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 GRM6O15303 877 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 PPM1GO15355 546 aaPredicted RBP5.12□□□□□ -1.59
CALD1-214ENST00000466704 AKAP10O43572 662 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 FZD7O75084 574 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 ABLIM3O94929 683 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 POU2F2P09086 479 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 MTHFD1P11586 935 aaKnown RBP5.12□□□□□ -1.59
CALD1-214ENST00000466704 MAKP20794 623 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 AKAP5P24588 427 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 PTTG1IPP53801 180 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 ZNF280AP59817 542 aaPredicted RBP5.12□□□□□ -1.59
CALD1-214ENST00000466704 DACT2Q5SW24 774 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 THEMIS2Q5TEJ8 643 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 TSHZ3Q63HK5 1081 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 USP45Q70EL2 814 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 FITM2Q8N6M3 262 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 DCBLD1Q8N8Z6 715 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 IFI44Q8TCB0 444 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 JPH3Q8WXH2 748 aaPredicted RBP5.12□□□□□ -1.59
CALD1-214ENST00000466704 HAS1Q92839 578 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 MRGPRX4Q96LA9 322 aa5.12□□□□□ -1.59
CALD1-214ENST00000466704 NUP88Q99567 741 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms