RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 PDCP20941 246 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 APOBEC3AP31941 199 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-205ENST00000466606 HSPA1LP34931 641 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 EPHB1P54762 984 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 ZNF280AP59817 542 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-205ENST00000466606 ATP8B2P98198 1209 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 PUM1Q14671 1186 aaKnown RBP eCLIP5.42□□□□□ -1.54
EDEM3-205ENST00000466606 DCAF17Q5H9S7 520 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-205ENST00000466606 ATXN7L2Q5T6C5 722 aaPredicted RBP5.42□□□□□ -1.54
EDEM3-205ENST00000466606 ZNF529Q6P280 563 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 RNF207Q6ZRF8 634 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 DCBLD1Q8N8Z6 715 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 CLPTM1LQ96KA5 538 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 LRGUKQ96M69 825 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 GTPBP4Q9BZE4 634 aaKnown RBP5.42□□□□□ -1.54
EDEM3-205ENST00000466606 CEP72Q9P209 647 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 EIF2B4Q9UI10 523 aaKnown RBP5.42□□□□□ -1.54
EDEM3-205ENST00000466606 ANKRD6Q9Y2G4 727 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 CCDC88BA6NC98 1476 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 PTPRMP28827 1452 aa5.42□□□□□ -1.54
EDEM3-205ENST00000466606 KIF21BO75037 1637 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 TCRBV7S2A1N4TA0A589 114 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 KIAA0391O15091 583 aaKnown RBP5.41□□□□□ -1.54
EDEM3-205ENST00000466606 AMHP03971 560 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 SNRPA1P09661 255 aaKnown RBP5.41□□□□□ -1.54
EDEM3-205ENST00000466606 SLC6A2P23975 617 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 CHN2P52757 468 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 CDC42EP1Q00587 391 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 DSC2Q02487 901 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 NHLH2Q02577 135 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 RRP12Q5JTH9 1297 aaKnown RBP5.41□□□□□ -1.54
EDEM3-205ENST00000466606 TMPRSS6Q8IU80 811 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 DRC7Q8IY82 874 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 ZFP28Q8NHY6 868 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 IFI44Q8TCB0 444 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 CPT1CQ8TCG5 803 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 CYFIP2Q96F07 1278 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 PLEKHG4BQ96PX9 1271 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 NDC1Q9BTX1 674 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 FBXO34Q9NWN3 711 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 EID1Q9Y6B2 187 aa5.41□□□□□ -1.54
EDEM3-205ENST00000466606 C1QTNF3-AMACRE9PGA6 284 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 PJA2O43164 708 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 RPS6KA4O75676 772 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 SCAF4O95104 1147 aaKnown RBP5.4□□□□□ -1.54
EDEM3-205ENST00000466606 POU2F2P09086 479 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 SBK3P0C264 359 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 RNASE9P60153 205 aaKnown RBP5.4□□□□□ -1.54
EDEM3-205ENST00000466606 TOB2Q14106 344 aaPredicted RBP5.4□□□□□ -1.54
EDEM3-205ENST00000466606 ZNF267Q14586 743 aaPredicted RBP5.4□□□□□ -1.54
EDEM3-205ENST00000466606 KHDC1Q4VXA5 237 aaKnown RBP5.4□□□□□ -1.54
EDEM3-205ENST00000466606 OTUD7BQ6GQQ9 843 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 HTR3DQ70Z44 454 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 MED25Q71SY5 747 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 GGNQ86UU5 652 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 CASKIN2Q8WXE0 1202 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 DMRTA2Q96SC8 542 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 VRK1Q99986 396 aaPredicted RBP5.4□□□□□ -1.54
EDEM3-205ENST00000466606 TEX101Q9BY14 249 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 CDH19Q9H159 772 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 ZNF768Q9H5H4 540 aaKnown RBP5.4□□□□□ -1.54
EDEM3-205ENST00000466606 TCF7L1Q9HCS4 588 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 KLHL42Q9P2K6 505 aa5.4□□□□□ -1.54
EDEM3-205ENST00000466606 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.4□□□□□ -1.54
EDEM3-205ENST00000466606 DRGXA6NNA5 263 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 GRXCR1A8MXD5 290 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 ZNF185O15231 689 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 MATN3O15232 486 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 PRPF3O43395 683 aaKnown RBP5.39□□□□□ -1.55
EDEM3-205ENST00000466606 PRSS23O95084 383 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 SCGB1D2O95969 90 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 ITGB1P05556 798 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 CTXN1P60606 82 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 SLC25A3Q00325 362 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 CREMQ03060 361 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 UBXN2BQ14CS0 331 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 RABL3Q5HYI8 236 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 IFIT1BQ5T764 474 aaKnown RBP5.39□□□□□ -1.55
EDEM3-205ENST00000466606 NAIF1Q69YI7 327 aaPredicted RBP5.39□□□□□ -1.55
EDEM3-205ENST00000466606 PPP4R3AQ6IN85 833 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 GADL1Q6ZQY3 521 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 USP45Q70EL2 814 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 PLXDC1Q8IUK5 500 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 GRAMD1CQ8IYS0 662 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 NSUN6Q8TEA1 469 aaKnown RBP5.39□□□□□ -1.55
EDEM3-205ENST00000466606 MRGPRX4Q96LA9 322 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 FAM193BQ96PV7 902 aaPredicted RBP5.39□□□□□ -1.55
EDEM3-205ENST00000466606 NEU1Q99519 415 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 ZNF341Q9BYN7 854 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 TRPM5Q9NZQ8 1165 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 CLCA2Q9UQC9 943 aa5.39□□□□□ -1.55
EDEM3-205ENST00000466606 CFAP20Q9Y6A4 193 aaKnown RBP5.39□□□□□ -1.55
EDEM3-205ENST00000466606 E2F8A0AVK6 867 aa5.38□□□□□ -1.55
EDEM3-205ENST00000466606 GRM6O15303 877 aa5.38□□□□□ -1.55
EDEM3-205ENST00000466606 TEX33O43247 280 aa5.38□□□□□ -1.55
EDEM3-205ENST00000466606 AP1G1O43747 822 aa5.38□□□□□ -1.55
EDEM3-205ENST00000466606 SGTAO43765 313 aa5.38□□□□□ -1.55
EDEM3-205ENST00000466606 POMCP01189 267 aa5.38□□□□□ -1.55
EDEM3-205ENST00000466606 MYBP10242 640 aa5.38□□□□□ -1.55
EDEM3-205ENST00000466606 SLC6A4P31645 630 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms