RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 JADE1Q6IE81 842 aa15.7■□□□□ 0.1
DNMT3A-208ENST00000466601 GDPD5Q8WTR4 605 aa15.7■□□□□ 0.1
DNMT3A-208ENST00000466601 DHTKD1Q96HY7 919 aaPredicted RBP15.7■□□□□ 0.1
DNMT3A-208ENST00000466601 TSG101Q99816 390 aa15.7■□□□□ 0.1
DNMT3A-208ENST00000466601 KIAA1671Q9BY89 1806 aa15.7■□□□□ 0.1
DNMT3A-208ENST00000466601 TDRD15B5MCY1 1934 aaKnown RBP15.7■□□□□ 0.1
DNMT3A-208ENST00000466601 NLRC5Q86WI3 1866 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 XPOTO43592 962 aaKnown RBP15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 FGF18O76093 207 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 ITGB1P05556 798 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 CCNE1P24864 410 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 RPL13P26373 211 aaKnown RBP15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 PLCB3Q01970 1234 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 SOX4Q06945 474 aaPredicted RBP15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 ZBTB6Q15916 424 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 SNRNP35Q16560 246 aaKnown RBP15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 EDRF1Q3B7T1 1238 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 ANKRD40Q6AI12 368 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 KLHL10Q6JEL2 608 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 RBM43Q6ZSC3 357 aaKnown RBP15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 SPPL3Q8TCT6 385 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 RABGGTAQ92696 567 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 C18orf25Q96B23 403 aaPredicted RBP15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 IGSF21Q96ID5 467 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 PAAF1Q9BRP4 392 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 COLEC11Q9BWP8 271 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 GOLGA2P5Q9HBQ8 144 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 ALG13Q9NP73 1137 aaKnown RBP15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 MTMR10Q9NXD2 777 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 TMEM63CQ9P1W3 806 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 CACNG4Q9UBN1 327 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 UBQLN1Q9UMX0 589 aaKnown RBP15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 PRG3Q9Y2Y8 225 aaPredicted RBP15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 DERAQ9Y315 318 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 TRIP11Q15643 1979 aa15.69■□□□□ 0.1
DNMT3A-208ENST00000466601 GRM6O15303 877 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 LPXNO60711 386 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 NFICP08651 508 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 NR2F2P24468 414 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 PMS1P54277 932 aaKnown RBP15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 WNT7BP56706 349 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 KRT17Q04695 432 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 ADAM9Q13443 819 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 TMEM132DQ14C87 1099 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 SURF1Q15526 300 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 CEP135Q66GS9 1140 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 TMEM173Q86WV6 379 aaPredicted RBP15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 MLKLQ8NB16 471 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 NELFBQ8WX92 580 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 DDX27Q96GQ7 796 aaKnown RBP15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 TMEM169Q96HH4 297 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 UROC1Q96N76 676 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 PDE11AQ9HCR9 933 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 TUBGCP4Q9UGJ1 667 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 FRMD4BQ9Y2L6 1034 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 C2CD2Q9Y426 696 aa15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.68■□□□□ 0.1
DNMT3A-208ENST00000466601 TRIM49BA6NDI0 452 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 CYP3A5P20815 502 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 RPL9P32969 192 aaKnown RBP15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 CASP4P49662 377 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 CLCNKBP51801 687 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 NLRP12P59046 1061 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 UBE3AQ05086 875 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 LRRC63Q05C16 580 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 CYP24A1Q07973 514 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 PAK1Q13153 545 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 PSMD6Q15008 389 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 KLHL40Q2TBA0 621 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 CAVIN1Q6NZI2 390 aaKnown RBP15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 NT5DC4Q86YG4 428 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 EFCAB13Q8IY85 973 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 BEST2Q8NFU1 509 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 BCL7CQ8WUZ0 217 aaPredicted RBP15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 POF1BQ8WVV4 589 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 SYAP1Q96A49 352 aaPredicted RBP15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 MFSD14AQ96MC6 490 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 GUCD1Q96NT3 240 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 GAS2L1Q99501 681 aaPredicted RBP15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 CDX2Q99626 313 aaPredicted RBP15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 MARCH5Q9NX47 278 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 PUF60Q9UHX1 559 aaKnown RBP15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 CTNND2Q9UQB3 1225 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 LZTS1Q9Y250 596 aa15.67■□□□□ 0.1
DNMT3A-208ENST00000466601 BICDL2A1A5D9 508 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 F8W810 466 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 PODXLO00592 558 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 CETN3O15182 167 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 TADA2AO75478 443 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 LRPAP1P30533 357 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 GUCY2FP51841 1108 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 TFAMQ00059 246 aaKnown RBP15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 FKBP3Q00688 224 aaKnown RBP15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 ADGRE1Q14246 886 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 UPP1Q16831 310 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 DCLRE1AQ6PJP8 1040 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 DDX53Q86TM3 631 aaKnown RBP15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 TMEM130Q8N3G9 435 aa15.66■□□□□ 0.1
DNMT3A-208ENST00000466601 CACTINQ8WUQ7 758 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms