RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 PPTC7Q8NI37 304 aa14.57□□□□□ -0.08
UBE4B-206ENST00000466379 PPP1R13LQ8WUF5 828 aa14.57□□□□□ -0.08
UBE4B-206ENST00000466379 C2orf40Q9H1Z8 148 aa14.57□□□□□ -0.08
UBE4B-206ENST00000466379 NMRK2Q9NPI5 230 aa14.57□□□□□ -0.08
UBE4B-206ENST00000466379 TARSL2A2RTX5 802 aaKnown RBP14.56□□□□□ -0.08
UBE4B-206ENST00000466379 ADCY6O43306 1168 aa14.56□□□□□ -0.08
UBE4B-206ENST00000466379 SSTR3P32745 418 aaPredicted RBP14.56□□□□□ -0.08
UBE4B-206ENST00000466379 MBTD1Q05BQ5 628 aa14.56□□□□□ -0.08
UBE4B-206ENST00000466379 TFDP1Q14186 410 aa14.56□□□□□ -0.08
UBE4B-206ENST00000466379 FAM110CQ1W6H9 321 aa14.56□□□□□ -0.08
UBE4B-206ENST00000466379 SYCE1Q8N0S2 351 aa14.56□□□□□ -0.08
UBE4B-206ENST00000466379 JPH2Q9BR39 696 aaPredicted RBP14.56□□□□□ -0.08
UBE4B-206ENST00000466379 C16orf70Q9BSU1 422 aa14.56□□□□□ -0.08
UBE4B-206ENST00000466379 MTMR12Q9C0I1 747 aa14.56□□□□□ -0.08
UBE4B-206ENST00000466379 AMFRQ9UKV5 643 aa14.56□□□□□ -0.08
UBE4B-206ENST00000466379 NUB1Q9Y5A7 615 aa14.56□□□□□ -0.08
UBE4B-206ENST00000466379 OGTO15294 1046 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 CST3P01034 146 aaPredicted RBP14.55□□□□□ -0.08
UBE4B-206ENST00000466379 VTNP04004 478 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 HUNKP57058 714 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 GPC5P78333 572 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 MCL1Q07820 350 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 ZNF568Q3ZCX4 644 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 PRAMEF19Q5SWL8 479 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 ATF7IP2Q5U623 682 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 ZNF467Q7Z7K2 595 aaPredicted RBP14.55□□□□□ -0.08
UBE4B-206ENST00000466379 TMEM192Q8IY95 271 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 TMEM130Q8N3G9 435 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 GDAP1L1Q96MZ0 367 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 FZD8Q9H461 694 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 L1RE1Q9UN81 338 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 A0A087WZ62 844 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 ACKR2O00590 384 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 PTENP60484 403 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 CUL2Q13617 745 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 NCOA4Q13772 614 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 KCTD19Q17RG1 926 aaPredicted RBP14.55□□□□□ -0.08
UBE4B-206ENST00000466379 ZNF484Q5JVG2 852 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 CCDC70Q6NSX1 233 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 C8orf74Q6P047 294 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 MPZL3Q6UWV2 235 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 ENOSF1Q7L5Y1 443 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 USP38Q8NB14 1042 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 HES6Q96HZ4 224 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 BTBD6Q96KE9 485 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 KRT12Q99456 494 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 FDXACB1Q9BRP7 624 aaPredicted RBP14.55□□□□□ -0.08
UBE4B-206ENST00000466379 TINF2Q9BSI4 451 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 RNF14Q9UBS8 474 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 CPSF3Q9UKF6 684 aaKnown RBP14.55□□□□□ -0.08
UBE4B-206ENST00000466379 AKT3Q9Y243 479 aa14.55□□□□□ -0.08
UBE4B-206ENST00000466379 ACO1P21399 889 aaKnown RBP14.54□□□□□ -0.08
UBE4B-206ENST00000466379 NOP14P78316 857 aaKnown RBP14.54□□□□□ -0.08
UBE4B-206ENST00000466379 ACVR2BQ13705 512 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 TSHZ1Q6ZSZ6 1077 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 PHLDB2Q86SQ0 1253 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 CPNE8Q86YQ8 564 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 RHOT2Q8IXI1 618 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 OR6J1Q8NGC5 347 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 ZNF653Q96CK0 615 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 PBKQ96KB5 322 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 AP1M1Q9BXS5 423 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 IFT122Q9HBG6 1241 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 PTPRHQ9HD43 1115 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 PCDHB4Q9Y5E5 795 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 H3BRB1 525 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 IGF2BP3O00425 579 aaKnown RBP eCLIP14.54□□□□□ -0.08
UBE4B-206ENST00000466379 DDX3YO15523 660 aaKnown RBP14.54□□□□□ -0.08
UBE4B-206ENST00000466379 ATP8B1O43520 1251 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 CFHP08603 1231 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 CLTAP09496 248 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 GZMAP12544 262 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 PROZP22891 400 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 KLHL7Q8IXQ5 586 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 EMID1Q96A84 441 aaPredicted RBP14.54□□□□□ -0.08
UBE4B-206ENST00000466379 CPB2Q96IY4 423 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 CDT1Q9H211 546 aa14.54□□□□□ -0.08
UBE4B-206ENST00000466379 TUT1Q9H6E5 874 aaKnown RBP14.54□□□□□ -0.08
UBE4B-206ENST00000466379 NOC2LQ9Y3T9 749 aaKnown RBP14.54□□□□□ -0.08
UBE4B-206ENST00000466379 MAP2K7O14733 419 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 TUBBP07437 444 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 MMP3P08254 477 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 MAPK4P31152 587 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 TFAMQ00059 246 aaKnown RBP14.53□□□□□ -0.08
UBE4B-206ENST00000466379 MESDQ14696 234 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 CLEC16AQ2KHT3 1053 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 DUSP28Q4G0W2 176 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 C2CD6Q53TS8 623 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 DCAF12L1Q5VU92 463 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 TMEM270Q6UE05 265 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 CCNI2Q6ZMN8 369 aaPredicted RBP14.53□□□□□ -0.08
UBE4B-206ENST00000466379 WDR49Q8IV35 697 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 LENG1Q96BZ8 264 aaPredicted RBP14.53□□□□□ -0.08
UBE4B-206ENST00000466379 NUP85Q9BW27 656 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 ALG6Q9Y672 507 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 MGAMO43451 1857 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 ZSCAN5CA6NGD5 496 aaPredicted RBP14.53□□□□□ -0.08
UBE4B-206ENST00000466379 CES2O00748 559 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 HOXC6P09630 235 aa14.53□□□□□ -0.08
UBE4B-206ENST00000466379 TNNT3P45378 269 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms