RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 C16orf59Q7L2K0 433 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 USP37Q86T82 979 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 ZMAT2Q96NC0 199 aaKnown RBP18.63■□□□□ 0.57
PTPRU-206ENST00000465525 C1orf112Q9NSG2 853 aa18.63■□□□□ 0.57
PTPRU-206ENST00000465525 TDRD15B5MCY1 1934 aaKnown RBP18.62■□□□□ 0.57
PTPRU-206ENST00000465525 EFCAB14O75071 495 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 FGBP02675 491 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 PBX1P40424 430 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 MLH1P40692 756 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 AFF1P51825 1210 aaKnown RBP18.62■□□□□ 0.57
PTPRU-206ENST00000465525 MCCD1P59942 119 aaPredicted RBP18.62■□□□□ 0.57
PTPRU-206ENST00000465525 CLDN10P78369 228 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 KCNMA1Q12791 1236 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 BIRC3Q13489 604 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 TDRD10Q5VZ19 366 aaKnown RBP18.62■□□□□ 0.57
PTPRU-206ENST00000465525 SV2AQ7L0J3 742 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 MRPL10Q7Z7H8 261 aaKnown RBP18.62■□□□□ 0.57
PTPRU-206ENST00000465525 WDR49Q8IV35 697 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 VSTM4Q8IW00 320 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 KIF12Q96FN5 646 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 GAD1Q99259 594 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 TMEM8AQ9HCN3 771 aa18.62■□□□□ 0.57
PTPRU-206ENST00000465525 STX10O60499 249 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 ZNF623O75123 536 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 BAIAP3O94812 1187 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 TMEM191BP0C7N4 346 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 SLC9A1P19634 815 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 FAM189BP81408 668 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 TMEM132DQ14C87 1099 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 SURF1Q15526 300 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 PSRC1Q6PGN9 363 aaPredicted RBP18.61■□□□□ 0.57
PTPRU-206ENST00000465525 ALKAL1Q6UXT8 129 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 HACE1Q8IYU2 909 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 TAS1R2Q8TE23 839 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 C18orf25Q96B23 403 aaPredicted RBP18.61■□□□□ 0.57
PTPRU-206ENST00000465525 LSM14BQ9BX40 385 aaKnown RBP18.61■□□□□ 0.57
PTPRU-206ENST00000465525 GCNT4Q9P109 453 aa18.61■□□□□ 0.57
PTPRU-206ENST00000465525 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.6■□□□□ 0.57
PTPRU-206ENST00000465525 C4BPAP04003 597 aaKnown RBP18.6■□□□□ 0.57
PTPRU-206ENST00000465525 KRT39Q6A163 491 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 ZNF365Q70YC5 407 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 ZNF598Q86UK7 904 aaKnown RBP18.6■□□□□ 0.57
PTPRU-206ENST00000465525 SEMA4DQ92854 862 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 ERGIC2Q96RQ1 377 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 ASB7Q9H672 318 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 PLEKHA5Q9HAU0 1116 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 FAM207AQ9NSI2 230 aaPredicted RBP18.6■□□□□ 0.57
PTPRU-206ENST00000465525 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
PTPRU-206ENST00000465525 CNTN3Q9P232 1028 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 PLAGL2Q9UPG8 496 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 INPP5FQ9Y2H2 1132 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 SIK3Q9Y2K2 1263 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 SMIM28A0A1B0GU29 152 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 PHACTR2O75167 634 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 VNN1O95497 513 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 FGFR1P11362 822 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 GTF2H1P32780 548 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 EPHB4P54760 987 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 ENPEPQ07075 957 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 LRMPQ12912 555 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 DUOXA2Q1HG44 320 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 ZACNQ401N2 412 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 TMEM240Q5SV17 173 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.6■□□□□ 0.57
PTPRU-206ENST00000465525 GBP6Q6ZN66 633 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 C15orf39Q6ZRI6 1047 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 PGBD4Q96DM1 585 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 INTS2Q9H0H0 1204 aaKnown RBP18.6■□□□□ 0.57
PTPRU-206ENST00000465525 RSAD1Q9HA92 442 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 MIOSQ9NXC5 875 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 TUBGCP4Q9UGJ1 667 aa18.6■□□□□ 0.57
PTPRU-206ENST00000465525 TTC3P53804 2025 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 ARL5CA6NH57 179 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 PTGESO14684 152 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 EPHB6O15197 1021 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 N4BP1O75113 896 aaKnown RBP18.59■□□□□ 0.57
PTPRU-206ENST00000465525 EOMESO95936 686 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 TNNC2P02585 160 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 PON1P27169 355 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 CDC25BP30305 580 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 PIK3CAP42336 1068 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 MAGEA10P43363 369 aaPredicted RBP18.59■□□□□ 0.57
PTPRU-206ENST00000465525 POU5F1Q01860 360 aaKnown RBP18.59■□□□□ 0.57
PTPRU-206ENST00000465525 EXOC3L4Q17RC7 722 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 EPC2Q52LR7 807 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 SPECC1LQ69YQ0 1117 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 OTOP2Q7RTS6 562 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 TRAPPC11Q7Z392 1133 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 CD302Q8IX05 232 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 HELQQ8TDG4 1101 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 ANKRD36BP1Q96IX9 119 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.59■□□□□ 0.57
PTPRU-206ENST00000465525 PI4K2AQ9BTU6 479 aa18.59■□□□□ 0.57
PTPRU-206ENST00000465525 A0A1W2PQC6 194 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 CLSTN1O94985 981 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 HLA-DRAP01903 254 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 GATMP50440 423 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 SCNN1GP51170 649 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 GOLGA8FQ08AF8 430 aa18.58■□□□□ 0.57
PTPRU-206ENST00000465525 GOLGA8DPQ0D2H9 430 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms