RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SAAL1Q96ER3 474 aa22.11■■□□□ 1.13
SKA3-205ENST00000465471 FBXL18Q96ME1 805 aa22.11■■□□□ 1.13
SKA3-205ENST00000465471 UROC1Q96N76 676 aa22.11■■□□□ 1.13
SKA3-205ENST00000465471 ZBP1Q9H171 429 aa22.11■■□□□ 1.13
SKA3-205ENST00000465471 NSUN3Q9H649 340 aaKnown RBP22.11■■□□□ 1.13
SKA3-205ENST00000465471 STK39Q9UEW8 545 aa22.11■■□□□ 1.13
SKA3-205ENST00000465471 PRUNE2Q8WUY3 3088 aa22.11■■□□□ 1.13
SKA3-205ENST00000465471 SPTBN5Q9NRC6 3674 aaKnown RBP22.11■■□□□ 1.13
SKA3-205ENST00000465471 TMEM189-UBE2V1I3L0A0 370 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 EXTL3O43909 919 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 SMC2O95347 1197 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 HS2ST1Q7LGA3 356 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 BRSK2Q8IWQ3 736 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 GPD1LQ8N335 351 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 GUF1Q8N442 669 aaKnown RBP22.1■■□□□ 1.13
SKA3-205ENST00000465471 ERCC4Q92889 916 aaPredicted RBP22.1■■□□□ 1.13
SKA3-205ENST00000465471 C18orf25Q96B23 403 aaPredicted RBP22.1■■□□□ 1.13
SKA3-205ENST00000465471 FAM213AQ9BRX8 229 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 COLEC11Q9BWP8 271 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 PCIF1Q9H4Z3 704 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 ASB7Q9H672 318 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 GOLGA2P5Q9HBQ8 144 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 RMND1Q9NWS8 449 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 HSPBP1Q9NZL4 362 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 DERAQ9Y315 318 aa22.1■■□□□ 1.13
SKA3-205ENST00000465471 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.1■■□□□ 1.13
SKA3-205ENST00000465471 KIF4AO95239 1232 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 CYP3A5P20815 502 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 UPP1Q16831 310 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 COBLL1Q53SF7 1204 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 CD300LGQ6UXG3 332 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 GOLGA5Q8TBA6 731 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 SMARCE1Q969G3 411 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 NGRNQ9NPE2 291 aaKnown RBP22.09■■□□□ 1.13
SKA3-205ENST00000465471 TUBGCP4Q9UGJ1 667 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 ADAM28Q9UKQ2 775 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 C2CD2Q9Y426 696 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 PCDHGC5Q9Y5F6 944 aa22.09■■□□□ 1.13
SKA3-205ENST00000465471 PDXKO00764 312 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 SOD2P04179 222 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 LRPAP1P30533 357 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 CLCNKBP51801 687 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 WNT7BP56706 349 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 COL19A1Q14993 1142 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 TCEAL5Q5H9L2 206 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 VPS52Q8N1B4 723 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 MICALL1Q8N3F8 863 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 RABGGTAQ92696 567 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 KIF12Q96FN5 646 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 DDX27Q96GQ7 796 aaKnown RBP22.08■■□□□ 1.13
SKA3-205ENST00000465471 TCF25Q9BQ70 676 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 HERC2P3Q9BVR0 1158 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 UBQLN1Q9UMX0 589 aaKnown RBP22.08■■□□□ 1.13
SKA3-205ENST00000465471 IRAK3Q9Y616 596 aa22.08■■□□□ 1.13
SKA3-205ENST00000465471 GOLGA8IPA6NC78 632 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 GOLGA8JA6NMD2 632 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 KIF20AO95235 890 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 IL18RAPO95256 599 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 NFICP08651 508 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 CTSAP10619 480 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 IGFBP6P24592 240 aaPredicted RBP22.07■■□□□ 1.12
SKA3-205ENST00000465471 RPL9P32969 192 aaKnown RBP22.07■■□□□ 1.12
SKA3-205ENST00000465471 SPAG1Q07617 926 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 CCDC85BQ15834 202 aaPredicted RBP22.07■■□□□ 1.12
SKA3-205ENST00000465471 ZNF658Q5TYW1 1059 aaPredicted RBP22.07■■□□□ 1.12
SKA3-205ENST00000465471 JADE1Q6IE81 842 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 FUT10Q6P4F1 479 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 DCLRE1AQ6PJP8 1040 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 ADGRD2Q7Z7M1 963 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 SLC9A9Q8IVB4 645 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 C3orf58Q8NDZ4 430 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 GPR62Q9BZJ7 368 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 DMAC2Q9NW81 257 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 RBAKQ9NYW8 714 aaPredicted RBP22.07■■□□□ 1.12
SKA3-205ENST00000465471 TRAF3IP3Q9Y228 551 aa22.07■■□□□ 1.12
SKA3-205ENST00000465471 VWA8A3KMH1 1905 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 PODXLO00592 558 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 CLIC2O15247 247 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 CSPG5O95196 566 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 SMC1AQ14683 1233 aaKnown RBP22.06■■□□□ 1.12
SKA3-205ENST00000465471 SPATA1Q5VX52 437 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 PLPP4Q5VZY2 271 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 NT5DC4Q86YG4 428 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 CBWD2Q8IUF1 395 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 EFCAB13Q8IY85 973 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 SMYD4Q8IYR2 804 aaPredicted RBP22.06■■□□□ 1.12
SKA3-205ENST00000465471 GTPBP4Q9BZE4 634 aaKnown RBP22.06■■□□□ 1.12
SKA3-205ENST00000465471 KIAA1586Q9HCI6 787 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 ENTPD7Q9NQZ7 604 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 CHST7Q9NS84 486 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 MAN1B1Q9UKM7 699 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 BRWD1Q9NSI6 2320 aa22.06■■□□□ 1.12
SKA3-205ENST00000465471 SF3B1O75533 1304 aaKnown RBP eCLIP22.06■■□□□ 1.12
SKA3-205ENST00000465471 C2orf71A6NGG8 1288 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 HIDE1A8MVS5 230 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 XPOTO43592 962 aaKnown RBP22.05■■□□□ 1.12
SKA3-205ENST00000465471 LILRB3O75022 631 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 HYAL1Q12794 435 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 TMEM132DQ14C87 1099 aa22.05■■□□□ 1.12
SKA3-205ENST00000465471 PTPN14Q15678 1187 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms