RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 SHISA7A6NL88 538 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 MAN2B1O00754 1011 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 RECQL4O94761 1208 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 BAG4O95429 457 aaKnown RBP13.3□□□□□ -0.28
TRA2B-208ENST00000465245 TDGF1P13385 188 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 TOB2Q14106 344 aaPredicted RBP13.3□□□□□ -0.28
TRA2B-208ENST00000465245 TANGO2Q6ICL3 276 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 PRR23BQ6ZRT6 265 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 PIK3AP1Q6ZUJ8 805 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 RTL10Q7L3V2 364 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 CELF5Q8N6W0 485 aaKnown RBP13.3□□□□□ -0.28
TRA2B-208ENST00000465245 IER2Q9BTL4 223 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 CXCL16Q9H2A7 254 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 BRD9Q9H8M2 597 aa13.3□□□□□ -0.28
TRA2B-208ENST00000465245 FRYQ5TBA9 3013 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 SLC30A4O14863 429 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 N4BP3O15049 544 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 USO1O60763 962 aaKnown RBP13.29□□□□□ -0.28
TRA2B-208ENST00000465245 LRP3O75074 770 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 LYPLA2O95372 231 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 LRG1P02750 347 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 RETP07949 1114 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 KCNA4P22459 653 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 FGFR3P22607 806 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 RARRES1P49788 294 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 CCR3P51677 355 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 STK3Q13188 491 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 GRM2Q14416 872 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 NAB2Q15742 525 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 MAEAQ7L5Y9 396 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 ZBTB8OSQ8IWT0 167 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 PDZD7Q9H5P4 517 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 LAMA1P25391 3075 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 CNOT1A5YKK6 2376 aaKnown RBP13.29□□□□□ -0.28
TRA2B-208ENST00000465245 GREB1Q4ZG55 1949 aa13.29□□□□□ -0.28
TRA2B-208ENST00000465245 TTLL13PA6NNM8 815 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 TMEM189-UBE2V1I3L0A0 370 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 B3GAT3O94766 335 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 PTPN2P17706 415 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 XBP1P17861 261 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 FCARP24071 287 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 TKTP29401 623 aaKnown RBP13.28□□□□□ -0.28
TRA2B-208ENST00000465245 CDCA2Q69YH5 1023 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-208ENST00000465245 POTEHQ6S545 545 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 RUFY3Q7L099 469 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 NOSTRINQ8IVI9 506 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 ZNF687Q8N1G0 1237 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 PIGOQ8TEQ8 1089 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 FAM3CQ92520 227 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 ZNF274Q96GC6 653 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-208ENST00000465245 DDX27Q96GQ7 796 aaKnown RBP13.28□□□□□ -0.28
TRA2B-208ENST00000465245 CORO1BQ9BR76 489 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 ADPGKQ9BRR6 497 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 LARP6Q9BRS8 491 aaKnown RBP13.28□□□□□ -0.28
TRA2B-208ENST00000465245 TRMT61BQ9BVS5 477 aaKnown RBP13.28□□□□□ -0.28
TRA2B-208ENST00000465245 ZFP14Q9HCL3 533 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 GPRC5CQ9NQ84 441 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 AVENQ9NQS1 362 aaPredicted RBP13.28□□□□□ -0.28
TRA2B-208ENST00000465245 SEMA4GQ9NTN9 838 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 BACE2Q9Y5Z0 518 aa13.28□□□□□ -0.28
TRA2B-208ENST00000465245 PRRG1O14668 218 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 ELF1P32519 619 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 RBM25P49756 843 aaKnown RBP13.27□□□□□ -0.29
TRA2B-208ENST00000465245 PRPF4BQ13523 1007 aaKnown RBP13.27□□□□□ -0.29
TRA2B-208ENST00000465245 SIM2Q14190 667 aaPredicted RBP13.27□□□□□ -0.29
TRA2B-208ENST00000465245 FAM187BQ17R55 369 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 FAM78AQ5JUQ0 283 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 GLRA4Q5JXX5 417 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 MAMSTRQ6ZN01 415 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 PRR23CQ6ZRP0 262 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 ANKS3Q6ZW76 656 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.27□□□□□ -0.29
TRA2B-208ENST00000465245 OXER1Q8TDS5 423 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 IRF7Q92985 503 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 TCEAL4Q96EI5 215 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 HSD17B14Q9BPX1 270 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 FZD8Q9H461 694 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 LMAN1LQ9HAT1 526 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 GJB4Q9NTQ9 266 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 PCDHA12Q9UN75 941 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 GDAQ9Y2T3 454 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 PIAS3Q9Y6X2 628 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 CITO14578 2027 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 SPAG17Q6Q759 2223 aa13.27□□□□□ -0.29
TRA2B-208ENST00000465245 ARHGEF37A1IGU5 675 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 FAM205CA6NFA0 338 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 I3L4J1 428 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 ZNF197O14709 1029 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 TRAPPC3O43617 180 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 CDKL5O76039 1030 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 PRKCBP05771 671 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 LIG1P18858 919 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 IGFBP6P24592 240 aaPredicted RBP13.26□□□□□ -0.29
TRA2B-208ENST00000465245 GDI1P31150 447 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 CLCNKBP51801 687 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 SATB1Q01826 763 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 ROR1Q01973 937 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 CSRP2Q16527 193 aa13.26□□□□□ -0.29
TRA2B-208ENST00000465245 CALCRLQ16602 461 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms