RNA–Protein interactions for RNA: ENST00000464279.5

SNX17-205, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-205ENST00000464279 CCDC82Q8N4S0 544 aa13.94□□□□□ -0.18
SNX17-205ENST00000464279 ASB16Q96NS5 453 aa13.94□□□□□ -0.18
SNX17-205ENST00000464279 HNRNPABQ99729 332 aaKnown RBP13.94□□□□□ -0.18
SNX17-205ENST00000464279 C8orf33Q9H7E9 229 aaPredicted RBP13.94□□□□□ -0.18
SNX17-205ENST00000464279 TPCN1Q9ULQ1 816 aa13.94□□□□□ -0.18
SNX17-205ENST00000464279 RAXQ9Y2V3 346 aa13.94□□□□□ -0.18
SNX17-205ENST00000464279 NOTCH4Q99466 2003 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 SF3B1O75533 1304 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNX17-205ENST00000464279 ARL5CA6NH57 179 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 SLC38A8A6NNN8 435 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 ARNTLO00327 626 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 DHX15O43143 795 aaKnown RBP13.93□□□□□ -0.18
SNX17-205ENST00000464279 ITGA4P13612 1032 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 ADD1P35611 737 aaKnown RBP13.93□□□□□ -0.18
SNX17-205ENST00000464279 MLH1P40692 756 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 SCNN1GP51170 649 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 KPNA1P52294 538 aaPredicted RBP13.93□□□□□ -0.18
SNX17-205ENST00000464279 CCT2P78371 535 aaKnown RBP13.93□□□□□ -0.18
SNX17-205ENST00000464279 PRKCEQ02156 737 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 RTL10Q7L3V2 364 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 NIPA1Q7RTP0 329 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 PIK3R5Q8WYR1 880 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 SLC39A7Q92504 469 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 GAD1Q99259 594 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 TTPALQ9BTX7 342 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 NCOA5Q9HCD5 579 aaKnown RBP13.93□□□□□ -0.18
SNX17-205ENST00000464279 NRBP2Q9NSY0 501 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 PCDHA10Q9Y5I2 948 aa13.93□□□□□ -0.18
SNX17-205ENST00000464279 IPO5O00410 1097 aaKnown RBP13.92□□□□□ -0.18
SNX17-205ENST00000464279 ZNF76P36508 570 aa13.92□□□□□ -0.18
SNX17-205ENST00000464279 SOX9P48436 509 aa13.92□□□□□ -0.18
SNX17-205ENST00000464279 CCINQ13939 588 aa13.92□□□□□ -0.18
SNX17-205ENST00000464279 KARSQ15046 597 aaKnown RBP13.92□□□□□ -0.18
SNX17-205ENST00000464279 RABEP1Q15276 862 aa13.92□□□□□ -0.18
SNX17-205ENST00000464279 TXNDC11Q6PKC3 985 aa13.92□□□□□ -0.18
SNX17-205ENST00000464279 RAB44Q7Z6P3 723 aaPredicted RBP13.92□□□□□ -0.18
SNX17-205ENST00000464279 CNNM3Q8NE01 707 aa13.92□□□□□ -0.18
SNX17-205ENST00000464279 SMARCD2Q92925 531 aa13.92□□□□□ -0.18
SNX17-205ENST00000464279 SLC8A2Q9UPR5 921 aa13.92□□□□□ -0.18
SNX17-205ENST00000464279 CFAP46Q8IYW2 2715 aa13.92□□□□□ -0.18
SNX17-205ENST00000464279 WDR27A2RRH5 827 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 SPECC1L-ADORA2AF8WAN1 911 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 J3QKU1 62 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 NRG2O14511 850 aaPredicted RBP13.91□□□□□ -0.18
SNX17-205ENST00000464279 ADAM12O43184 909 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 TADA2AO75478 443 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 CTHP32929 405 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 DNM2P50570 870 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 STK3Q13188 491 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 NTRK3Q16288 839 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 ZNF423Q2M1K9 1284 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 UBXN11Q5T124 520 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 PLA2G4DQ86XP0 818 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 RHPN2Q8IUC4 686 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 LNX1Q8TBB1 728 aaPredicted RBP13.91□□□□□ -0.18
SNX17-205ENST00000464279 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 NLRP4Q96MN2 994 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 ANO3Q9BYT9 981 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 SLKQ9H2G2 1235 aaPredicted RBP13.91□□□□□ -0.18
SNX17-205ENST00000464279 TBC1D22BQ9NU19 505 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 SAMM50Q9Y512 469 aa13.91□□□□□ -0.18
SNX17-205ENST00000464279 CELSR3Q9NYQ7 3312 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 hCG_1642624A0A1W2PR95 340 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 MYBPHLA2RUH7 354 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 ARHGAP6O43182 974 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 PFKFB2O60825 505 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 LARGE1O95461 756 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 IFNAR1P17181 557 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 PTPN2P17706 415 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 SCRN1Q12765 414 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 RAB33AQ14088 237 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 PON2Q15165 354 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 ME3Q16798 604 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 PRSS36Q5K4E3 855 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 PDXDC1Q6P996 788 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 PIP4P1Q86T03 277 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 RALGPS2Q86X27 583 aaPredicted RBP13.9□□□□□ -0.18
SNX17-205ENST00000464279 CEP57Q86XR8 500 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 MFSD6LQ8IWD5 586 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 YAF2Q8IY57 180 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 SMG8Q8ND04 991 aaKnown RBP13.9□□□□□ -0.18
SNX17-205ENST00000464279 MDM1Q8TC05 714 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 TCEAL4Q96EI5 215 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 ZFP42Q96MM3 310 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 ZNF577Q9BSK1 485 aa13.9□□□□□ -0.18
SNX17-205ENST00000464279 V9GY48 417 aaPredicted RBP13.9□□□□□ -0.18
SNX17-205ENST00000464279 USP9XQ93008 2570 aaPredicted RBP13.9□□□□□ -0.18
SNX17-205ENST00000464279 ASCC3Q8N3C0 2202 aaKnown RBP13.9□□□□□ -0.18
SNX17-205ENST00000464279 MYH9P35579 1960 aaKnown RBP13.89□□□□□ -0.19
SNX17-205ENST00000464279 PATE3B3GLJ2 98 aa13.89□□□□□ -0.19
SNX17-205ENST00000464279 ZNF197O14709 1029 aa13.89□□□□□ -0.19
SNX17-205ENST00000464279 CPLX1O14810 134 aa13.89□□□□□ -0.19
SNX17-205ENST00000464279 MICAL2O94851 1124 aa13.89□□□□□ -0.19
SNX17-205ENST00000464279 FOSP01100 380 aaPredicted RBP13.89□□□□□ -0.19
SNX17-205ENST00000464279 SREBF1P36956 1147 aa13.89□□□□□ -0.19
SNX17-205ENST00000464279 VIPR2P41587 438 aa13.89□□□□□ -0.19
SNX17-205ENST00000464279 IRX4P78413 519 aa13.89□□□□□ -0.19
SNX17-205ENST00000464279 LMAN2Q12907 356 aa13.89□□□□□ -0.19
SNX17-205ENST00000464279 PKN3Q6P5Z2 889 aa13.89□□□□□ -0.19
SNX17-205ENST00000464279 CYP2U1Q7Z449 544 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms