RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 DHX38Q92620 1227 aaKnown RBP23.35■■□□□ 1.33
PDLIM2-216ENST00000464275 ARHGEF26Q96DR7 871 aa23.35■■□□□ 1.33
PDLIM2-216ENST00000464275 FAM84AQ96KN4 292 aa23.35■■□□□ 1.33
PDLIM2-216ENST00000464275 NLRP4Q96MN2 994 aa23.35■■□□□ 1.33
PDLIM2-216ENST00000464275 TINF2Q9BSI4 451 aa23.35■■□□□ 1.33
PDLIM2-216ENST00000464275 NFKBIZQ9BYH8 718 aa23.35■■□□□ 1.33
PDLIM2-216ENST00000464275 ABHD16BQ9H3Z7 469 aa23.35■■□□□ 1.33
PDLIM2-216ENST00000464275 OSGEPQ9NPF4 335 aa23.35■■□□□ 1.33
PDLIM2-216ENST00000464275 EHD2Q9NZN4 543 aa23.35■■□□□ 1.33
PDLIM2-216ENST00000464275 ABLIM1O14639 778 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 PPFIA4O75335 1185 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 MMEP08473 750 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 DNA2P51530 1060 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 GPC5P78333 572 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 POU5F1BQ06416 359 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 NT5DC3Q86UY8 548 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 MS4A14Q96JA4 679 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 RNF216Q9NWF9 866 aaPredicted RBP23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 SLC5A4Q9NY91 659 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 AMFRQ9UKV5 643 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 KRT5P13647 590 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 PROZP22891 400 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 IGBP1P78318 339 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 DUSP28Q4G0W2 176 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 SEZ6Q53EL9 994 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 CST9Q5W186 159 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 MPZL3Q6UWV2 235 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 WDR49Q8IV35 697 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 SELENOOQ9BVL4 669 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 GOLPH3Q9H4A6 298 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 SMARCAL1Q9NZC9 954 aa23.34■■□□□ 1.33
PDLIM2-216ENST00000464275 INO80B-WBP1J3KQ70 363 aa23.33■■□□□ 1.33
PDLIM2-216ENST00000464275 KCNK3O14649 394 aa23.33■■□□□ 1.33
PDLIM2-216ENST00000464275 TNFSF9P41273 254 aa23.33■■□□□ 1.33
PDLIM2-216ENST00000464275 BPIFB4P59827 614 aa23.33■■□□□ 1.33
PDLIM2-216ENST00000464275 IQSEC1Q6DN90 963 aa23.33■■□□□ 1.33
PDLIM2-216ENST00000464275 DDX1Q92499 740 aaKnown RBP23.33■■□□□ 1.33
PDLIM2-216ENST00000464275 ELMO3Q96BJ8 720 aa23.33■■□□□ 1.33
PDLIM2-216ENST00000464275 C16orf70Q9BSU1 422 aa23.33■■□□□ 1.33
PDLIM2-216ENST00000464275 INO80BQ9C086 356 aaPredicted RBP23.33■■□□□ 1.33
PDLIM2-216ENST00000464275 CPSF3Q9UKF6 684 aaKnown RBP23.33■■□□□ 1.33
PDLIM2-216ENST00000464275 BUB1BO60566 1050 aaPredicted RBP23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 PHACTR2O75167 634 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 GJB1P08034 283 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 MBTD1Q05BQ5 628 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 ACVR2BQ13705 512 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 ATF7IP2Q5U623 682 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 LINC01465Q8N7H1 131 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 OR5B17Q8NGF7 314 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 NPLOC4Q8TAT6 608 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 PTPRHQ9HD43 1115 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 ACP6Q9NPH0 428 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 CWC15Q9P013 229 aaKnown RBP23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 VPS18Q9P253 973 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 SMPD1P17405 629 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 PHKA2P46019 1235 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 HUNKP57058 714 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 ZNF677Q86XU0 584 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 HES6Q96HZ4 224 aa23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 PRMT7Q9NVM4 692 aaPredicted RBP23.32■■□□□ 1.32
PDLIM2-216ENST00000464275 ZNF286BP0CG31 522 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 HOXD8P13378 290 aaPredicted RBP23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 TBXAS1P24557 533 aaPredicted RBP23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 CUL2Q13617 745 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 CCNI2Q6ZMN8 369 aaPredicted RBP23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 IFNLR1Q8IU57 520 aaPredicted RBP23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 CCDC102AQ96A19 550 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 ZBTB10Q96DT7 871 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 TNFSF13BQ9Y275 285 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 H3BRB1 525 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 CLTAP09496 248 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 FAM187BQ17R55 369 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 TMEM132AQ24JP5 1023 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 ZNF568Q3ZCX4 644 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 GLE1Q53GS7 698 aaKnown RBP23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 SPOPLQ6IQ16 392 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 OR6J1Q8NGC5 347 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 ACTRT1Q8TDG2 376 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 TUT1Q9H6E5 874 aaKnown RBP23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 RBM12Q9NTZ6 932 aaKnown RBP23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 CTTNBP2NLQ9P2B4 639 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 COG5Q9UP83 839 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 PCDHB2Q9Y5E7 798 aa23.31■■□□□ 1.32
PDLIM2-216ENST00000464275 MTA2O94776 668 aa23.3■■□□□ 1.32
PDLIM2-216ENST00000464275 TMOD1P28289 359 aa23.3■■□□□ 1.32
PDLIM2-216ENST00000464275 NCOA4Q13772 614 aa23.3■■□□□ 1.32
PDLIM2-216ENST00000464275 ACAD10Q6JQN1 1059 aa23.3■■□□□ 1.32
PDLIM2-216ENST00000464275 USP38Q8NB14 1042 aa23.3■■□□□ 1.32
PDLIM2-216ENST00000464275 ZNF668Q96K58 619 aaPredicted RBP23.3■■□□□ 1.32
PDLIM2-216ENST00000464275 LRRC1Q9BTT6 524 aa23.3■■□□□ 1.32
PDLIM2-216ENST00000464275 APOBEC3GQ9HC16 384 aaKnown RBP23.3■■□□□ 1.32
PDLIM2-216ENST00000464275 CPA4Q9UI42 421 aa23.3■■□□□ 1.32
PDLIM2-216ENST00000464275 RPS6KA5O75582 802 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 MMP3P08254 477 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 NOP14P78316 857 aaKnown RBP23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 C11orf63Q6NUN7 778 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 IMPG2Q9BZV3 1241 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 MINDY3Q9H8M7 445 aa23.29■■□□□ 1.32
PDLIM2-216ENST00000464275 IFT122Q9HBG6 1241 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms