RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 SPEM2Q0P670 501 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 PRPF4BQ13523 1007 aaKnown RBP14.68□□□□□ -0.06
MRPL55-224ENST00000464148 ST3GAL2Q16842 350 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 SLC5A9Q2M3M2 681 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 TANGO2Q6ICL3 276 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 NOSTRINQ8IVI9 506 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 DNASE1L2Q92874 299 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 ELSPBP1Q96BH3 223 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 CHAMP1Q96JM3 812 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 CXCL16Q9H2A7 254 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 PDZD7Q9H5P4 517 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 BRD9Q9H8M2 597 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 ZSWIM6Q9HCJ5 1215 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 GPRC5CQ9NQ84 441 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 GJB4Q9NTQ9 266 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 MTRRQ9UBK8 725 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 GDAQ9Y2T3 454 aa14.68□□□□□ -0.06
MRPL55-224ENST00000464148 ZFHX4Q86UP3 3567 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 VWA8A3KMH1 1905 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 NOTCH4Q99466 2003 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 MAN2B1O00754 1011 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 PRRG1O14668 218 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 TRAPPC3O43617 180 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 B3GAT3O94766 335 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 REC8O95072 547 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 CEBPBP17676 345 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 LIG1P18858 919 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 ELF1P32519 619 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 FZD5Q13467 585 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 GRM2Q14416 872 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 NAB2Q15742 525 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 CALCRLQ16602 461 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 LAIR1Q6GTX8 287 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 PRR23BQ6ZRT6 265 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 CELF5Q8N6W0 485 aaKnown RBP14.67□□□□□ -0.06
MRPL55-224ENST00000464148 C2orf40Q9H1Z8 148 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 FZD8Q9H461 694 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 TTC12Q9H892 705 aaPredicted RBP14.67□□□□□ -0.06
MRPL55-224ENST00000464148 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.67□□□□□ -0.06
MRPL55-224ENST00000464148 SPTBN2O15020 2390 aa14.67□□□□□ -0.06
MRPL55-224ENST00000464148 TPRP12270 2363 aaKnown RBP14.67□□□□□ -0.06
MRPL55-224ENST00000464148 TTLL13PA6NNM8 815 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 ADRB1P08588 477 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 ATP2B1P20020 1258 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 TKTP29401 623 aaKnown RBP14.66□□□□□ -0.06
MRPL55-224ENST00000464148 TXKP42681 527 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 CLCNKBP51801 687 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 MAPK6Q16659 721 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 FAM187BQ17R55 369 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 EARS2Q5JPH6 523 aaKnown RBP14.66□□□□□ -0.06
MRPL55-224ENST00000464148 PPM1JQ5JR12 505 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 CDCA2Q69YH5 1023 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-224ENST00000464148 ANKS3Q6ZW76 656 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 MCPH1Q8NEM0 835 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 CORO1BQ9BR76 489 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 TRMT61BQ9BVS5 477 aaKnown RBP14.66□□□□□ -0.06
MRPL55-224ENST00000464148 CHRDQ9H2X0 955 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 ZFP14Q9HCL3 533 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 BACE2Q9Y5Z0 518 aa14.66□□□□□ -0.06
MRPL55-224ENST00000464148 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-224ENST00000464148 FAM205CA6NFA0 338 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 TMEM189-UBE2V1I3L0A0 370 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 I3L4J1 428 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 PRKCBP05771 671 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 XRCC6P12956 609 aaKnown RBP eCLIP14.65□□□□□ -0.06
MRPL55-224ENST00000464148 IGFBP6P24592 240 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-224ENST00000464148 RBM25P49756 843 aaKnown RBP14.65□□□□□ -0.06
MRPL55-224ENST00000464148 CCR3P51677 355 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 ARPP19P56211 112 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 FAM78AQ5JUQ0 283 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 GLRA4Q5JXX5 417 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 NETO1Q8TDF5 533 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 FAM3CQ92520 227 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 IRF7Q92985 503 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 DDX27Q96GQ7 796 aaKnown RBP14.65□□□□□ -0.06
MRPL55-224ENST00000464148 IER2Q9BTL4 223 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 LMAN1LQ9HAT1 526 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 AVENQ9NQS1 362 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-224ENST00000464148 USP20Q9Y2K6 914 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 STK36Q9NRP7 1315 aa14.65□□□□□ -0.06
MRPL55-224ENST00000464148 SHISA7A6NL88 538 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 ZNF197O14709 1029 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 DTNBO60941 627 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 RETP07949 1114 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 TDGF1P13385 188 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 KCNA4P22459 653 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 FCARP24071 287 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 GDI1P31150 447 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 KRT2P35908 639 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 ROR1Q01973 937 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 NR5A1Q13285 461 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 DCAF4L1Q3SXM0 396 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 POTEHQ6S545 545 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 PDZD4Q76G19 769 aaPredicted RBP14.64□□□□□ -0.07
MRPL55-224ENST00000464148 ZNF461Q8TAF7 563 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 DEPTORQ8TB45 409 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 TCEAL4Q96EI5 215 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 UROC1Q96N76 676 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 CYP4F11Q9HBI6 524 aa14.64□□□□□ -0.07
MRPL55-224ENST00000464148 BRMS1Q9HCU9 246 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms