RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 TRIP11Q15643 1979 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 CACNA1BQ00975 2339 aa19.06■□□□□ 0.64
HMGN1-209ENST00000463631 LAMTOR5O43504 91 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 ECI2O75521 394 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 CYP11B2P19099 503 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 EFNA5P52803 228 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 TMEM132AQ24JP5 1023 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 EEF1DP3Q658K8 133 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 PADI6Q6TGC4 694 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 NELL1Q92832 810 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 CLDN23Q96B33 292 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 UROC1Q96N76 676 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 SPATA6Q9NWH7 488 aaPredicted RBP19.05■□□□□ 0.64
HMGN1-209ENST00000463631 HCFC1R1Q9NWW0 138 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 DNMT3BQ9UBC3 853 aaKnown RBP19.05■□□□□ 0.64
HMGN1-209ENST00000463631 CDY1Q9Y6F8 540 aa19.05■□□□□ 0.64
HMGN1-209ENST00000463631 B3GAT3O94766 335 aa19.04■□□□□ 0.64
HMGN1-209ENST00000463631 RPA1P27694 616 aa19.04■□□□□ 0.64
HMGN1-209ENST00000463631 RPS9P46781 194 aaKnown RBP19.04■□□□□ 0.64
HMGN1-209ENST00000463631 ORC2Q13416 577 aaPredicted RBP19.04■□□□□ 0.64
HMGN1-209ENST00000463631 UBXN2BQ14CS0 331 aa19.04■□□□□ 0.64
HMGN1-209ENST00000463631 UPP1Q16831 310 aa19.04■□□□□ 0.64
HMGN1-209ENST00000463631 ANKS3Q6ZW76 656 aa19.04■□□□□ 0.64
HMGN1-209ENST00000463631 DCLK2Q8N568 766 aa19.04■□□□□ 0.64
HMGN1-209ENST00000463631 ZBTB44Q8NCP5 570 aa19.04■□□□□ 0.64
HMGN1-209ENST00000463631 DEPTORQ8TB45 409 aa19.04■□□□□ 0.64
HMGN1-209ENST00000463631 DDX27Q96GQ7 796 aaKnown RBP19.04■□□□□ 0.64
HMGN1-209ENST00000463631 NELL2Q99435 816 aa19.04■□□□□ 0.64
HMGN1-209ENST00000463631 GDAQ9Y2T3 454 aa19.04■□□□□ 0.64
HMGN1-209ENST00000463631 MTF2Q9Y483 593 aaPredicted RBP19.04■□□□□ 0.64
HMGN1-209ENST00000463631 ARHGEF37A1IGU5 675 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 FAM170BA6NMN3 283 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 TRAPPC3O43617 180 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 MUTP22033 750 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 ME3Q16798 604 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 ZBTB41Q5SVQ8 909 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 SLC8B1Q6J4K2 584 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 CD300LGQ6UXG3 332 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 APBB1IPQ7Z5R6 666 aaPredicted RBP19.03■□□□□ 0.64
HMGN1-209ENST00000463631 NECAB1Q8N987 351 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 ERMNQ8TAM6 284 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 MRPS23Q9Y3D9 190 aaKnown RBP19.03■□□□□ 0.64
HMGN1-209ENST00000463631 KMT2BQ9UMN6 2715 aaPredicted RBP19.03■□□□□ 0.64
HMGN1-209ENST00000463631 COL4A2P08572 1712 aa19.03■□□□□ 0.64
HMGN1-209ENST00000463631 ARHGEF35A5YM69 484 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 LARGE1O95461 756 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 IGFBP6P24592 240 aaPredicted RBP19.02■□□□□ 0.64
HMGN1-209ENST00000463631 TKTP29401 623 aaKnown RBP19.02■□□□□ 0.64
HMGN1-209ENST00000463631 CLCNKBP51801 687 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 TRIM29Q14134 588 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 SLC5A9Q2M3M2 681 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 GLRA4Q5JXX5 417 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 ATF7IP2Q5U623 682 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 TPRG1Q6ZUI0 275 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 C3orf58Q8NDZ4 430 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 ING5Q8WYH8 240 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 DNASE1L2Q92874 299 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 EPC1Q9H2F5 836 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 PRMT8Q9NR22 394 aaPredicted RBP19.02■□□□□ 0.64
HMGN1-209ENST00000463631 ZSCAN32Q9NX65 697 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 USP20Q9Y2K6 914 aa19.02■□□□□ 0.64
HMGN1-209ENST00000463631 NCAM2O15394 837 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 LILRB5O75023 590 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 ABLIM3O94929 683 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 RHOP08100 348 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 TARSP26639 723 aaKnown RBP19.01■□□□□ 0.63
HMGN1-209ENST00000463631 MCM7P33993 719 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 ROR1Q01973 937 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 XKR4Q5GH76 650 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 VARS2Q5ST30 1063 aaKnown RBP19.01■□□□□ 0.63
HMGN1-209ENST00000463631 NT5DC1Q5TFE4 455 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 GPR161Q8N6U8 529 aaKnown RBP19.01■□□□□ 0.63
HMGN1-209ENST00000463631 ZNF461Q8TAF7 563 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 ATRIPQ8WXE1 791 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 KIFAP3Q92845 792 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 ELSPBP1Q96BH3 223 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 TNFSF13BQ9Y275 285 aa19.01■□□□□ 0.63
HMGN1-209ENST00000463631 MRPS17Q9Y2R5 130 aaKnown RBP19.01■□□□□ 0.63
HMGN1-209ENST00000463631 SHISA7A6NL88 538 aa19■□□□□ 0.63
HMGN1-209ENST00000463631 JAK2O60674 1132 aa19■□□□□ 0.63
HMGN1-209ENST00000463631 OR52Z1P0C646 297 aa19■□□□□ 0.63
HMGN1-209ENST00000463631 CD72P21854 359 aa19■□□□□ 0.63
HMGN1-209ENST00000463631 CSTF1Q05048 431 aaKnown RBP19■□□□□ 0.63
HMGN1-209ENST00000463631 HAUS3Q68CZ6 603 aa19■□□□□ 0.63
HMGN1-209ENST00000463631 ZNF852Q6ZMS4 543 aa19■□□□□ 0.63
HMGN1-209ENST00000463631 IFT74Q96LB3 600 aa19■□□□□ 0.63
HMGN1-209ENST00000463631 KIFC3Q9BVG8 833 aa19■□□□□ 0.63
HMGN1-209ENST00000463631 FAM126AQ9BYI3 521 aaPredicted RBP19■□□□□ 0.63
HMGN1-209ENST00000463631 TOPORSQ9NS56 1045 aaPredicted RBP19■□□□□ 0.63
HMGN1-209ENST00000463631 SLC38A7Q9NVC3 462 aa19■□□□□ 0.63
HMGN1-209ENST00000463631 NCDNQ9UBB6 729 aa19■□□□□ 0.63
HMGN1-209ENST00000463631 CHD8Q9HCK8 2581 aa18.99■□□□□ 0.63
HMGN1-209ENST00000463631 SMIM28A0A1B0GU29 152 aa18.99■□□□□ 0.63
HMGN1-209ENST00000463631 TBC1D4O60343 1298 aa18.99■□□□□ 0.63
HMGN1-209ENST00000463631 MICAL2O94851 1124 aa18.99■□□□□ 0.63
HMGN1-209ENST00000463631 CEBPBP17676 345 aa18.99■□□□□ 0.63
HMGN1-209ENST00000463631 PTPN2P17706 415 aa18.99■□□□□ 0.63
HMGN1-209ENST00000463631 LIG1P18858 919 aa18.99■□□□□ 0.63
HMGN1-209ENST00000463631 SDHBP21912 280 aa18.99■□□□□ 0.63
HMGN1-209ENST00000463631 FCARP24071 287 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms