RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 RIPOR3Q96MK2 946 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 NECTIN4Q96NY8 510 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 TTPALQ9BTX7 342 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 CUEDC2Q9H467 287 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 SFXN1Q9H9B4 322 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 MRPL44Q9H9J2 332 aaKnown RBP17.72■□□□□ 0.43
COL1A1-202ENST00000463440 PLEKHA5Q9HAU0 1116 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 GOLGA2P5Q9HBQ8 144 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 FNIP2Q9P278 1114 aa17.72■□□□□ 0.43
COL1A1-202ENST00000463440 OGTO15294 1046 aa17.71■□□□□ 0.43
COL1A1-202ENST00000463440 TRAPPC3O43617 180 aa17.71■□□□□ 0.43
COL1A1-202ENST00000463440 GLUD1P00367 558 aa17.71■□□□□ 0.43
COL1A1-202ENST00000463440 C1RP00736 705 aa17.71■□□□□ 0.43
COL1A1-202ENST00000463440 DNM1Q05193 864 aaKnown RBP17.71■□□□□ 0.43
COL1A1-202ENST00000463440 ZC2HC1CQ53FD0 456 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-202ENST00000463440 PDXDC1Q6P996 788 aa17.71■□□□□ 0.43
COL1A1-202ENST00000463440 CEP57Q86XR8 500 aa17.71■□□□□ 0.43
COL1A1-202ENST00000463440 C12orf76Q8N812 135 aaPredicted RBP17.71■□□□□ 0.43
COL1A1-202ENST00000463440 IQUBQ8NA54 791 aa17.71■□□□□ 0.43
COL1A1-202ENST00000463440 ZMAT2Q96NC0 199 aaKnown RBP17.71■□□□□ 0.43
COL1A1-202ENST00000463440 MSTO1Q9BUK6 570 aa17.71■□□□□ 0.43
COL1A1-202ENST00000463440 C1QTNF1Q9BXJ1 281 aa17.71■□□□□ 0.43
COL1A1-202ENST00000463440 HAPLN2Q9GZV7 340 aa17.71■□□□□ 0.43
COL1A1-202ENST00000463440 A0A0B4J269 797 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 LOC730098B7Z3J9 87 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 CXCL8P10145 99 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 ALADP13716 330 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 RPL9P32969 192 aaKnown RBP17.7■□□□□ 0.42
COL1A1-202ENST00000463440 AMPD3Q01432 767 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 SOX4Q06945 474 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-202ENST00000463440 HERC4Q5GLZ8 1057 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-202ENST00000463440 RTP2Q5QGT7 225 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 ATAT1Q5SQI0 421 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 AXDND1Q5T1B0 1012 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-202ENST00000463440 SLFN12LQ6IEE8 588 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 SHC4Q6S5L8 630 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 PRSS55Q6UWB4 352 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-202ENST00000463440 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-202ENST00000463440 PIK3R5Q8WYR1 880 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 KHSRPQ92945 711 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL1A1-202ENST00000463440 DHX58Q96C10 678 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 RPGRIP1Q96KN7 1286 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 TNMDQ9H2S6 317 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 RPF1Q9H9Y2 349 aaKnown RBP17.7■□□□□ 0.42
COL1A1-202ENST00000463440 OLFML3Q9NRN5 406 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 PANK4Q9NVE7 773 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 FAM13BQ9NYF5 915 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 PCDHA7Q9UN72 937 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 EXOC7Q9UPT5 735 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.7■□□□□ 0.42
COL1A1-202ENST00000463440 MUC3AQ02505 3323 aa17.7■□□□□ 0.42
COL1A1-202ENST00000463440 TTC26A0AVF1 554 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 PI4K2BG5E9Z4 385 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 PODXLO00592 558 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 MEFVO15553 781 aaPredicted RBP17.69■□□□□ 0.42
COL1A1-202ENST00000463440 PPP2R3AQ06190 1150 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 BECN1Q14457 450 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 E2F4Q16254 413 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 PSMD5Q16401 504 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 SLC39A4Q6P5W5 647 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 TMC5Q6UXY8 1006 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 PALB2Q86YC2 1186 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 GLYCTKQ8IVS8 523 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 CCDC65Q8IXS2 484 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 HDAC7Q8WUI4 952 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 C18orf25Q96B23 403 aaPredicted RBP17.69■□□□□ 0.42
COL1A1-202ENST00000463440 EPHX3Q9H6B9 360 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 MAN1C1Q9NR34 630 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 TBC1D7Q9P0N9 293 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 RCOR1Q9UKL0 485 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 PCDHB13Q9Y5F0 798 aa17.69■□□□□ 0.42
COL1A1-202ENST00000463440 FRMD3A2A2Y4 597 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 ANKRD63C9JTQ0 380 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 XPOTO43592 962 aaKnown RBP17.68■□□□□ 0.42
COL1A1-202ENST00000463440 PPP1R37O75864 691 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 GCNT3O95395 438 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 RPL17P18621 184 aaKnown RBP17.68■□□□□ 0.42
COL1A1-202ENST00000463440 FGFR3P22607 806 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 TNFSF9P41273 254 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 ALCAMQ13740 583 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 POSTNQ15063 836 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 KANK3Q6NY19 840 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 CD300LGQ6UXG3 332 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 RNF135Q8IUD6 432 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 CD302Q8IX05 232 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 C3orf58Q8NDZ4 430 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 LNX1Q8TBB1 728 aaPredicted RBP17.68■□□□□ 0.42
COL1A1-202ENST00000463440 STAMQ92783 540 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 KIF12Q96FN5 646 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 ACCSQ96QU6 501 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 TSPAN18Q96SJ8 248 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 STRA6Q9BX79 667 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 PLEKHA4Q9H4M7 779 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 POMKQ9H5K3 350 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 MAGEF1Q9HAY2 307 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 KBTBD4Q9NVX7 518 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 NR2E1Q9Y466 385 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 NUB1Q9Y5A7 615 aa17.68■□□□□ 0.42
COL1A1-202ENST00000463440 LACTBL1A8MY62 500 aa17.67■□□□□ 0.42
COL1A1-202ENST00000463440 POLR2DO15514 142 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms