RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ANKS3Q6ZW76 656 aa21.75■■□□□ 1.07
VARS-221ENST00000463184 BORCS6Q96GS4 357 aa21.75■■□□□ 1.07
VARS-221ENST00000463184 KIFC3Q9BVG8 833 aa21.75■■□□□ 1.07
VARS-221ENST00000463184 OSBPL6Q9BZF3 934 aa21.75■■□□□ 1.07
VARS-221ENST00000463184 FOXP1Q9H334 677 aaPredicted RBP21.75■■□□□ 1.07
VARS-221ENST00000463184 CDY1Q9Y6F8 540 aa21.75■■□□□ 1.07
VARS-221ENST00000463184 VWA8A3KMH1 1905 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 K7ERI5 159 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 ST3GAL1Q11201 340 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 CD300LGQ6UXG3 332 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 NPAS3Q8IXF0 933 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 C8orf76Q96K31 380 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 TBC1D32Q96NH3 1257 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 BCO2Q9BYV7 579 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 BHMT2Q9H2M3 363 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 HCFC1R1Q9NWW0 138 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 TNFSF13BQ9Y275 285 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 MYH15Q9Y2K3 1946 aa21.74■■□□□ 1.07
VARS-221ENST00000463184 EP300Q09472 2414 aaPredicted RBP21.74■■□□□ 1.07
VARS-221ENST00000463184 LRRN2O75325 713 aa21.73■■□□□ 1.07
VARS-221ENST00000463184 IGFBP6P24592 240 aaPredicted RBP21.73■■□□□ 1.07
VARS-221ENST00000463184 TKTP29401 623 aaKnown RBP21.73■■□□□ 1.07
VARS-221ENST00000463184 CCT6AP40227 531 aaKnown RBP21.73■■□□□ 1.07
VARS-221ENST00000463184 YARSP54577 528 aaKnown RBP21.73■■□□□ 1.07
VARS-221ENST00000463184 DDX27Q96GQ7 796 aaKnown RBP21.73■■□□□ 1.07
VARS-221ENST00000463184 KIF2CQ99661 725 aa21.73■■□□□ 1.07
VARS-221ENST00000463184 POLD4Q9HCU8 107 aa21.73■■□□□ 1.07
VARS-221ENST00000463184 AVENQ9NQS1 362 aaPredicted RBP21.73■■□□□ 1.07
VARS-221ENST00000463184 TOPORSQ9NS56 1045 aaPredicted RBP21.73■■□□□ 1.07
VARS-221ENST00000463184 GDE1Q9NZC3 331 aa21.73■■□□□ 1.07
VARS-221ENST00000463184 MRPS23Q9Y3D9 190 aaKnown RBP21.73■■□□□ 1.07
VARS-221ENST00000463184 CACNA1IQ9P0X4 2223 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 SMIM28A0A1B0GU29 152 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 MAGEA9P43362 315 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 TRAPPC10P48553 1259 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 FXR2P51116 673 aaKnown RBP eCLIP21.72■■□□□ 1.071e-9■■■■□ 23.7
VARS-221ENST00000463184 ECM1Q16610 540 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 ZNF528Q3MIS6 628 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 XKR4Q5GH76 650 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 TTC38Q5R3I4 469 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 MAML2Q8IZL2 1156 aaPredicted RBP21.72■■□□□ 1.07
VARS-221ENST00000463184 ZNF461Q8TAF7 563 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 KXD1Q9BQD3 176 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 CCDC94Q9BW85 323 aaPredicted RBP21.72■■□□□ 1.07
VARS-221ENST00000463184 SLC38A7Q9NVC3 462 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 STK24Q9Y6E0 443 aa21.72■■□□□ 1.07
VARS-221ENST00000463184 FAM170BA6NMN3 283 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 ECI2O75521 394 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 RHOP08100 348 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 GRM5P41594 1212 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 PDIA5Q14554 519 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 UBXN2BQ14CS0 331 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 SLC8B1Q6J4K2 584 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 ALKAL1Q6UXT8 129 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 KIAA2013Q8IYS2 634 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 C3orf58Q8NDZ4 430 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 RUBCNQ92622 972 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 NELL2Q99435 816 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 HINFPQ9BQA5 517 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 LLPHQ9BRT6 129 aaKnown RBP21.71■■□□□ 1.07
VARS-221ENST00000463184 TMEM134Q9H6X4 195 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 GOLGA2P5Q9HBQ8 144 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 SPATA6Q9NWH7 488 aaPredicted RBP21.71■■□□□ 1.07
VARS-221ENST00000463184 LRWD1Q9UFC0 647 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 FBXO4Q9UKT5 387 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 KIAA1024Q9UPX6 916 aa21.71■■□□□ 1.07
VARS-221ENST00000463184 FANCMQ8IYD8 2048 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 NOTCH4Q99466 2003 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 ZNF292O60281 2723 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 ARHGEF37A1IGU5 675 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 CCDC169A6NNP5 214 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 LAMTOR5O43504 91 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 KINO60870 393 aaKnown RBP21.7■■□□□ 1.06
VARS-221ENST00000463184 PTPN2P17706 415 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 ELF1P32519 619 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 BRCC3P46736 316 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 C4orf32Q8N8J7 132 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 FBXO18Q8NFZ0 1043 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 ING5Q8WYH8 240 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 RMDN1Q96DB5 314 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 ACO2Q99798 780 aaKnown RBP21.7■■□□□ 1.06
VARS-221ENST00000463184 PTPRHQ9HD43 1115 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 LTB4R2Q9NPC1 389 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 DDX19AQ9NUU7 478 aaKnown RBP21.7■■□□□ 1.06
VARS-221ENST00000463184 LIMCH1Q9UPQ0 1083 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 MTF2Q9Y483 593 aaPredicted RBP21.7■■□□□ 1.06
VARS-221ENST00000463184 PHLPP2Q6ZVD8 1323 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 WDR87Q6ZQQ6 2873 aa21.7■■□□□ 1.06
VARS-221ENST00000463184 MIA3Q5JRA6 1907 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 I3L4J1 428 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 NCAM2O15394 837 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 ABLIM3O94929 683 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 LRG1P02750 347 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 ROR1Q01973 937 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 SOX4Q06945 474 aaPredicted RBP21.69■■□□□ 1.06
VARS-221ENST00000463184 GNL2Q13823 731 aaKnown RBP21.69■■□□□ 1.06
VARS-221ENST00000463184 RABEP1Q15276 862 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 ZBTB41Q5SVQ8 909 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 MCRS1Q96EZ8 462 aa21.69■■□□□ 1.06
VARS-221ENST00000463184 MRPL4Q9BYD3 311 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms