RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.74■■□□□ 1.07
MSH5-210ENST00000463094 TGM5O43548 720 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 STK38Q15208 465 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 PTPAQ15257 358 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 NAB2Q15742 525 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 UPP1Q16831 310 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 FAM173BQ6P4H8 233 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 CCDC73Q6ZRK6 1079 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 SUGP1Q8IWZ8 645 aaKnown RBP21.73■■□□□ 1.07
MSH5-210ENST00000463094 KREMEN2Q8NCW0 462 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 SNX21Q969T3 373 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 EPSTI1Q96J88 318 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 ZBTB45Q96K62 511 aaPredicted RBP21.73■■□□□ 1.07
MSH5-210ENST00000463094 ZNF396Q96N95 335 aaPredicted RBP21.73■■□□□ 1.07
MSH5-210ENST00000463094 CXCL16Q9H2A7 254 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 ZDHHC7Q9NXF8 308 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 RAPGEFL1Q9UHV5 662 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 FBXO2Q9UK22 296 aaPredicted RBP21.73■■□□□ 1.07
MSH5-210ENST00000463094 TBX20Q9UMR3 447 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 SORCS3Q9UPU3 1222 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 MTMR6Q9Y217 621 aa21.73■■□□□ 1.07
MSH5-210ENST00000463094 TMEM221A6NGB7 291 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 M0R296 226 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 CLTAP09496 248 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 KCNE1P15382 129 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 RPL9P32969 192 aaKnown RBP21.72■■□□□ 1.07
MSH5-210ENST00000463094 MCL1Q07820 350 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 SIGLEC14Q08ET2 396 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 SV2BQ7L1I2 683 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 UBALD2Q8IYN6 164 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 ZDHHC14Q8IZN3 488 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 PBXIP1Q96AQ6 731 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 FAM122AQ96E09 287 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 PLEKHA5Q9HAU0 1116 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 GOLGA2P5Q9HBQ8 144 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 CNTN3Q9P232 1028 aa21.72■■□□□ 1.07
MSH5-210ENST00000463094 PODXLO00592 558 aa21.71■■□□□ 1.07
MSH5-210ENST00000463094 XPOTO43592 962 aaKnown RBP21.71■■□□□ 1.07
MSH5-210ENST00000463094 STAT6P42226 847 aa21.71■■□□□ 1.07
MSH5-210ENST00000463094 ZNF131P52739 623 aa21.71■■□□□ 1.07
MSH5-210ENST00000463094 PPP2R3AQ06190 1150 aa21.71■■□□□ 1.07
MSH5-210ENST00000463094 XKR4Q5GH76 650 aa21.71■■□□□ 1.07
MSH5-210ENST00000463094 ALKAL1Q6UXT8 129 aa21.71■■□□□ 1.07
MSH5-210ENST00000463094 ANKS3Q6ZW76 656 aa21.71■■□□□ 1.07
MSH5-210ENST00000463094 LNX1Q8TBB1 728 aaPredicted RBP21.71■■□□□ 1.07
MSH5-210ENST00000463094 LIMD1Q9UGP4 676 aa21.71■■□□□ 1.07
MSH5-210ENST00000463094 ARIH1Q9Y4X5 557 aaPredicted RBP21.71■■□□□ 1.07
MSH5-210ENST00000463094 RFPL2O75678 378 aa21.7■■□□□ 1.06
MSH5-210ENST00000463094 GBP2P32456 591 aaPredicted RBP21.7■■□□□ 1.06
MSH5-210ENST00000463094 SLC39A14Q15043 492 aa21.7■■□□□ 1.06
MSH5-210ENST00000463094 SEZ6Q53EL9 994 aa21.7■■□□□ 1.06
MSH5-210ENST00000463094 PPM1LQ5SGD2 360 aa21.7■■□□□ 1.06
MSH5-210ENST00000463094 HFE2Q6ZVN8 426 aa21.7■■□□□ 1.06
MSH5-210ENST00000463094 DYMQ7RTS9 669 aa21.7■■□□□ 1.06
MSH5-210ENST00000463094 CLIC6Q96NY7 704 aa21.7■■□□□ 1.06
MSH5-210ENST00000463094 USP28Q96RU2 1077 aa21.7■■□□□ 1.06
MSH5-210ENST00000463094 RHOBTB2Q9BYZ6 727 aa21.7■■□□□ 1.06
MSH5-210ENST00000463094 ABLIM1O14639 778 aa21.69■■□□□ 1.06
MSH5-210ENST00000463094 FGFR3P22607 806 aa21.69■■□□□ 1.06
MSH5-210ENST00000463094 MCM4P33991 863 aa21.69■■□□□ 1.06
MSH5-210ENST00000463094 CLSTN3Q9BQT9 956 aa21.69■■□□□ 1.06
MSH5-210ENST00000463094 MSTO1Q9BUK6 570 aa21.69■■□□□ 1.06
MSH5-210ENST00000463094 PRKD2Q9BZL6 878 aa21.69■■□□□ 1.06
MSH5-210ENST00000463094 RPF1Q9H9Y2 349 aaKnown RBP21.69■■□□□ 1.06
MSH5-210ENST00000463094 WDR6Q9NNW5 1121 aaKnown RBP21.69■■□□□ 1.06
MSH5-210ENST00000463094 GTF3C3Q9Y5Q9 886 aa21.69■■□□□ 1.06
MSH5-210ENST00000463094 CLUHO75153 1309 aa21.69■■□□□ 1.06
MSH5-210ENST00000463094 H7C4K7 107 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 OGTO15294 1046 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 XYLBO75191 536 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 ZMYND10O75800 440 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 CXCL8P10145 99 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 GAP43P17677 238 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 OR1D2P34982 312 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 SLC10A6Q3KNW5 377 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 SLFN12LQ6IEE8 588 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 LILRA6Q6PI73 481 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 USP49Q70CQ1 688 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 KCNN1Q92952 543 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 C18orf25Q96B23 403 aaPredicted RBP21.68■■□□□ 1.06
MSH5-210ENST00000463094 FAM212AQ96EL1 285 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 KIF12Q96FN5 646 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 ZMAT2Q96NC0 199 aaKnown RBP21.68■■□□□ 1.06
MSH5-210ENST00000463094 MTRRQ9UBK8 725 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 SEL1LQ9UBV2 794 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 POLIQ9UNA4 740 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 CDY1Q9Y6F8 540 aa21.68■■□□□ 1.06
MSH5-210ENST00000463094 I3L4J1 428 aa21.67■■□□□ 1.06
MSH5-210ENST00000463094 SYN3O14994 580 aa21.67■■□□□ 1.06
MSH5-210ENST00000463094 C8AP07357 584 aa21.67■■□□□ 1.06
MSH5-210ENST00000463094 HNRNPA1P09651 372 aaKnown RBP eCLIP21.67■■□□□ 1.06
MSH5-210ENST00000463094 TKTP29401 623 aaKnown RBP21.67■■□□□ 1.06
MSH5-210ENST00000463094 NMT1P30419 496 aaKnown RBP21.67■■□□□ 1.06
MSH5-210ENST00000463094 ELF1P32519 619 aa21.67■■□□□ 1.06
MSH5-210ENST00000463094 BRCC3P46736 316 aa21.67■■□□□ 1.06
MSH5-210ENST00000463094 SOX4Q06945 474 aaPredicted RBP21.67■■□□□ 1.06
MSH5-210ENST00000463094 BMP8AQ7Z5Y6 402 aa21.67■■□□□ 1.06
MSH5-210ENST00000463094 APPL2Q8NEU8 664 aa21.67■■□□□ 1.06
MSH5-210ENST00000463094 DDX12PQ92771 950 aa21.67■■□□□ 1.06
MSH5-210ENST00000463094 TSPAN18Q96SJ8 248 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms