RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 PRPF4BQ13523 1007 aaKnown RBP15.58■□□□□ 0.09
HDAC6-213ENST00000462730 IFI16Q16666 785 aaKnown RBP15.58■□□□□ 0.09
HDAC6-213ENST00000462730 TMEM132AQ24JP5 1023 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 BRSK2Q8IWQ3 736 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 RPUSD2Q8IZ73 545 aaKnown RBP15.58■□□□□ 0.09
HDAC6-213ENST00000462730 KAT6AQ92794 2004 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 KAT2BQ92831 832 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 OSBPL9Q96SU4 736 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 PPP1R16BQ96T49 567 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 TLR10Q9BXR5 811 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 AP5M1Q9H0R1 490 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 TSKSQ9UJT2 592 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 Q9Y3F1 56 aa15.58■□□□□ 0.09
HDAC6-213ENST00000462730 NCANO14594 1321 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 CYP26A1O43174 497 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 VTNP04004 478 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 TCP1P17987 556 aaKnown RBP15.58■□□□□ 0.08
HDAC6-213ENST00000462730 TMOD1P28289 359 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 TNFSF9P41273 254 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 SP3Q02447 781 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 MBTD1Q05BQ5 628 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 MCL1Q07820 350 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 WDR44Q5JSH3 913 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 NOP9Q86U38 636 aaKnown RBP15.58■□□□□ 0.08
HDAC6-213ENST00000462730 PALB2Q86YC2 1186 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 ZNF784Q8NCA9 323 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-213ENST00000462730 PPP1R13LQ8WUF5 828 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 LMBR1Q8WVP7 490 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 DHX38Q92620 1227 aaKnown RBP15.58■□□□□ 0.08
HDAC6-213ENST00000462730 PSMB7Q99436 277 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 PARD6BQ9BYG5 372 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 FZD8Q9H461 694 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 ARFGAP3Q9NP61 516 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 SETD4Q9NVD3 440 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 TMEM51Q9NW97 253 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 TAS2R14Q9NYV8 317 aa15.58■□□□□ 0.08
HDAC6-213ENST00000462730 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.58■□□□□ 0.08
HDAC6-213ENST00000462730 A0A0A6YYK5 440 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-213ENST00000462730 FAM170AA1A519 330 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 ACKR2O00590 384 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 ABLIM1O14639 778 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 OGTO15294 1046 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 B4GALT5O43286 388 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 FAM189A1O60320 539 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 VNN1O95497 513 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 TMEM253P0C7T8 217 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 SMIM10L2AP0DMW4 78 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 SMIM10L2BP0DMW5 78 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 PRLRP16471 622 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 PHKA2P46019 1235 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 TUBB4BP68371 445 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 ATF7IP2Q5U623 682 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 MFSD14CQ5VZR4 134 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 MPZL3Q6UWV2 235 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 TSHZ1Q6ZSZ6 1077 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 ENOSF1Q7L5Y1 443 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 NOA1Q8NC60 698 aaKnown RBP15.57■□□□□ 0.08
HDAC6-213ENST00000462730 EPS8L1Q8TE68 723 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 COG1Q8WTW3 980 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 NFKBIZQ9BYH8 718 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 MINDY3Q9H8M7 445 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 IFT122Q9HBG6 1241 aa15.57■□□□□ 0.08
HDAC6-213ENST00000462730 NOCTQ9UK39 431 aaKnown RBP15.57■□□□□ 0.08
HDAC6-213ENST00000462730 PDE2AO00408 941 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-213ENST00000462730 POLR3GO15318 223 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-213ENST00000462730 MYL3P08590 195 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 CHRNB2P17787 502 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 GCNT1Q02742 428 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 MFSD10Q14728 455 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 FSCN1Q16658 493 aaKnown RBP15.56■□□□□ 0.08
HDAC6-213ENST00000462730 MEI1Q5TIA1 1274 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 SLC47A2Q86VL8 602 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 OR5B17Q8NGF7 314 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 TPCN2Q8NHX9 752 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 CTNNBL1Q8WYA6 563 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-213ENST00000462730 FAM81BQ96LP2 452 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 A0A087WZ62 844 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 TRPA1O75762 1119 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 KRT5P13647 590 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 ABCB4P21439 1286 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 PROZP22891 400 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 CXCR5P32302 372 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 TRIM32Q13049 653 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 ZNF568Q3ZCX4 644 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 EEF1DP3Q658K8 133 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 CREG2Q8IUH2 290 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 FAM212AQ96EL1 285 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 FDXACB1Q9BRP7 624 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-213ENST00000462730 ACP6Q9NPH0 428 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 NRCAMQ92823 1304 aa15.56■□□□□ 0.08
HDAC6-213ENST00000462730 MYADML2A6NDP7 307 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 RRN3P2A6NIE6 340 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 PHACTR2O75167 634 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 DUSP11O75319 330 aaKnown RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 RHOXF2BP0C7M4 288 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 IQCF3P0C7M6 154 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 OAS2P29728 719 aaKnown RBP15.55■□□□□ 0.08
HDAC6-213ENST00000462730 PSEN2P49810 448 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 PDE6CP51160 858 aa15.55■□□□□ 0.08
HDAC6-213ENST00000462730 DNA2P51530 1060 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms